Evidence map›Paper›PMID 27251789›Full record

ArticleThe Journal of investigative dermatology2016

Phosphoproteomic Analyses of NRAS(G12) and NRAS(Q61) Mutant Melanocytes Reveal Increased CK2α Kinase Levels in NRAS(Q61) Mutant Cells.

Christian Posch, Martina Sanlorenzo, Igor Vujic, Juan A Oses-Prieto, Brian D Cholewa, Sarasa T Kim, Jeffrey Ma, Kevin Lai, Mitchell Zekhtser, Rosaura Esteve-Puig and 6 more

Abstract read
In one paragraph

Article in The Journal of investigative dermatology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 34 citations in OpenAlex.

  1. Differential Outcomes in Codon 12/13 and Codon 61Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
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  6. Relative genotoxicity of polycyclic aromatic hydrocarbons inferred from free energy perturbation approaches.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  9. Reclassification ofTherapeutic advances in medical oncology · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Christian PoschDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA; Department of Dermatology, The Rudolfstiftung Hospital, Academic Teaching Hospital, Medical University Vienna, Vienna, Austria; Leukemia Biology Group, Children's Cancer Research Institute, Vienna, Austria; School of Medicine, Sigmund Freud University, Vienna, Austria. Electronic address: cposch81@gmail.com.
Martina SanlorenzoDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA; Department of Medical Sciences, Section of Dermatology, University of Turin, Turin, Italy.
Igor VujicDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA; Department of Dermatology, The Rudolfstiftung Hospital, Academic Teaching Hospital, Medical University Vienna, Vienna, Austria; School of Medicine, Sigmund Freud University, Vienna, Austria.
Juan A Oses-PrietoDepartment of Pharmaceutical Chemistry, School of Pharmacy, University of California San Francisco, San Francisco, California, USA.
Brian D CholewaDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA.
Sarasa T KimDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
Jeffrey MaDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
Kevin LaiDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
Mitchell ZekhtserDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
Rosaura Esteve-PuigDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
Gary GreenDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
Shreya ChandDepartment of Pharmaceutical Chemistry, School of Pharmacy, University of California San Francisco, San Francisco, California, USA.
Alma L BurlingameDepartment of Pharmaceutical Chemistry, School of Pharmacy, University of California San Francisco, San Francisco, California, USA.
Renate Panzer-GrümayerLeukemia Biology Group, Children's Cancer Research Institute, Vienna, Austria.
Klemens RappersbergerDepartment of Dermatology, The Rudolfstiftung Hospital, Academic Teaching Hospital, Medical University Vienna, Vienna, Austria.
Susana Ortiz-UrdaDepartment of Dermatology, Mt. Zion Cancer Research Center, University of California San Francisco, San Francisco, California, USA.
University of California, San Francisco · USRudolfinerhaus Hospital · ATCancer Research Center · USSt Anna Children's Hospital · ATUniversity of Turin · ITVanderbilt University Medical Center · US

Funding

YEAST THREONINE &SERINE KINASESP41RR001614 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ORTIZ DE MONTELLANO, PAUL R · 1985 to 2011
$24.1M
Role of KIT in Early Melanoma DevelopmentK08CA155035 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ORTIZ URDA, SUSANA · 2011 to 2015
$610k
NCI NIH HHS K08 CA155035NCRR NIH HHS P41 RR001614
6 · The paper itself

Abstract

In melanoma, mutant and thereby constantly active neuroblastoma rat sarcoma (NRAS) affects 15-20% of tumors, contributing to tumor initiation, growth, invasion, and metastasis. Recent therapeutic approaches aim to mimic RAS extinction by interfering with critical signaling pathways downstream of the mutant protein. This study investigates the phosphoproteome of primary human melanocytes bearing mutations in the two hot spots of NRAS, NRAS(G12) and NRAS(Q61). Stable isotope labeling by amino acids in cell culture followed by mass spectrometry identified 14,155 spectra of 3,371 unique phosphopeptides mapping to 1,159 proteins (false discovery rate < 2%). Data revealed pronounced PI3K/AKT signaling in NRAS(G12V) mutant cells and pronounced mitogen-activated protein kinase (MAPK) signaling in NRAS(Q61L) variants. Computer-based prediction models for kinases involved, revealed that CK2α is significantly overrepresented in primary human melanocytes bearing NRAS(Q61L) mutations. Similar differences were found in human NRAS(Q61) mutant melanoma cell lines that were also more sensitive to pharmacologic CK2α inhibition compared with NRAS(G12) mutant cells. Furthermore, CK2α levels were pronounced in patient samples of NRAS(Q61) mutant melanoma at the mRNA and protein level. The preclinical findings of this study reveal that codon 12 and 61 mutant NRAS cells have distinct signaling characteristics that could allow for the development of more effective, mutation-specific treatment modalities.

Indexed as

Casein Kinase IIGTP PhosphohydrolasesHumansMass SpectrometryMelanocytesMelanomaMembrane ProteinsMitogen-Activated Protein KinasesMutationPhosphatidylinositol 3-KinasePhosphopeptidesProteomicsProto-Oncogene Proteins c-aktRNA, MessengerSignal TransductionSkin NeoplasmsCasein Kinase IICSNK2A1 protein, humanGTP PhosphohydrolasesMembrane ProteinsMitogen-Activated Protein KinasesNRAS protein, humanPhosphatidylinositol 3-KinasePhosphopeptidesProto-Oncogene Proteins c-aktRNA, Messenger

Identifiers

PMID27251789
PMCPMC6373467
OpenAlexW2395297479

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.