Evidence map›Paper›PMID 27251124›Full record

ArticlePlant cell reports2016

Increase of anthraquinone content in Rubia cordifolia cells transformed by native and constitutively active forms of the AtCPK1 gene.

Yury N Shkryl, G N Veremeichik, D S Makhazen, S A Silantieva, N P Mishchenko, E A Vasileva, S A Fedoreyev, V P Bulgakov

Abstract read
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In one paragraph

Article in Plant cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 33 citations in OpenAlex.

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  6. Engineered FungusJournal of fungi (Basel, Switzerland) · 2022
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  8. Full-Length Transcriptome Survey and Expression Analysis ofInternational journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Yury N ShkrylInstitute of Biology and Soil Science, Far Eastern Branch of Russian Academy of Sciences, 159 Stoletija St., Vladivostok, 690022, Russia. yn80@mail.ru.
G N VeremeichikInstitute of Biology and Soil Science, Far Eastern Branch of Russian Academy of Sciences, 159 Stoletija St., Vladivostok, 690022, Russia.
D S MakhazenInstitute of Biology and Soil Science, Far Eastern Branch of Russian Academy of Sciences, 159 Stoletija St., Vladivostok, 690022, Russia.
S A SilantievaInstitute of Biology and Soil Science, Far Eastern Branch of Russian Academy of Sciences, 159 Stoletija St., Vladivostok, 690022, Russia.
N P MishchenkoG.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Vladivostok, 690022, Russia.
E A VasilevaG.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Vladivostok, 690022, Russia.
S A FedoreyevG.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Vladivostok, 690022, Russia.
V P BulgakovInstitute of Biology and Soil Science, Far Eastern Branch of Russian Academy of Sciences, 159 Stoletija St., Vladivostok, 690022, Russia.
Institute of Chemistry, Far Eastern Branch of the Russian Academy of Sciences · RUPacific Institute of Bioorganic Chemistry. GB Elyakova Far Eastern Branch of the Russian Academy of Sciences · RUFar Eastern Federal University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageOverexpression of both native and mutant forms of AtCPK1 in Rubia cordifolia cells increased anthraquinone production and transcript abundance of the RcIPPI, RcOSBL, RcOSBS , and RcICS genes to different extents. Calcium-dependent protein kinases (CDPKs) are involved in various cell processes and are regulated by a calcium signal system. CDPKs also function in plant defense against stress factors such as pathogens, temperature, and salinity. In this study, we compared the effect of heterologous expression of two forms of the Arabidopsis AtCPK1 gene, native and constitutively active (Ca(2+)-independent), on anthraquinone production in transgenic Rubia cordifolia cells. Significant qualitative and quantitative differences were found in the content of anthraquinone derivatives in control and AtCPK1-transgenic calli. Expression of the AtCPK1 gene increased anthraquinone production by 3 and 12 times for native and constitutively active forms, respectively, compared with control cells. In addition, we identified and quantified the expression of genes encoding key enzymes of the anthraquinone biosynthesis pathway, including isochorismate synthase (ICS), o-succinylbenzoate synthase (OSBS), o-succinylbenzoate ligase (OSBL), and isopentenyl diphosphate isomerase (IPPi). In all AtCPK1-transgenic cell lines, expression of ICS, OSBS, OSBL, and IPPi increased considerably at 14-15 days of subculture and decreased at the end of cultivation (30 days). The results suggest that both native and constitutively active AtCPK1 forms induced anthraquinone accumulation at the logarithmic growth stage via enhancement of expression of genes involved in the metabolism of anthraquinones or their regulatory mechanisms.

Indexed as

Genes, PlantTransformation, GeneticAnthraquinonesArabidopsisArabidopsis ProteinsBiomassChromatography, High Pressure LiquidGene Expression Regulation, PlantMass SpectrometryPhenotypePlants, Genetically ModifiedProtein KinasesRubiaAnthraquinonesArabidopsis ProteinsCPK1 protein, ArabidopsisProtein KinasesAnthraquinonesAtCPK1Plant cell culturesRubia cordifolia

Identifiers

PMID27251124
OpenAlexW2462577271

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.