Evidence map›Paper›PMID 27250029›Full record

ArticleOncotarget2016

Genetic polymorphisms in TNIP1 increase the risk of gastric carcinoma.

Zhao Liu, Yuting Shi, Yuyan Na, Qi Zhang, Sizhe Cao, Xianglong Duan, Xiyang Zhang, Hua Yang, Tianbo Jin, Yiming Li

Abstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Observational
  4. Article
  5. Article
  6. Article
  7. International journal of clinical and experimental pathology · 2018
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhao LiuDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University, Xi'an 710004, China.
Yuting ShiDepartment of Medical Oncology, Graduate School of Inner Mongolia Medical University, Hohhot 010000, China.
Yuyan NaDepartment of Pediatric Orthopedics, The Second Affiliated Hospital of Inner Mongolia Medical University, Hohhot 010030, China.
Qi ZhangDepartment of Medical, Xi'an Chest Hospital, Xi'an TB&Thoracic Tumor Hospital, Xi'an 710100, China.
Sizhe CaoDepartment of Medical, Xi'an Chest Hospital, Xi'an TB&Thoracic Tumor Hospital, Xi'an 710100, China.
Xianglong DuanSecond Department of General Surgery, Shaanxi Province People's Hospital, Xi'an 710001, China.
Xiyang ZhangDepartment of Biochemistry, School of Life Sciences, Northwest University, Xi'an 710069, China.
Hua YangDepartment of Biochemistry, School of Life Sciences, Northwest University, Xi'an 710069, China.
Tianbo JinDepartment of Biochemistry, School of Life Sciences, Northwest University, Xi'an 710069, China.
Yiming LiDepartment of General Surgery, The Second Affiliated Hospital, Xi'an Jiaotong University, Xi'an 710004, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The distribution and levels of TNIP1 in malignant and normal gastric mucosa are different, but it is not known whether TNIP1 polymorphisms are related to gastric carcinogenesis. To assess the association between four TNIP1 SNPs (rs3792792, rs4958881, rs7708392, rs10036748) and carcinogenesis, we used Sequenom Mass-ARRAY technology to determine the genotypes of 302 gastric carcinoma patients and 300 healthy controls in a Northwest Chinese Han population. These data were then compared using the Chi-square test/Fisher's exact test, genetic model analysis, and haplotype analysis. Odds ratios (OR) and 95% confidence intervals (CI) were used to evaluate the correlation. We observed that patients with the "G" allele of rs7708392 and the "C" allele of rs10036748 showed an increased risk of gastric carcinoma (OR= 1.335, 95%CI: 1.021-1.745, P= 0.035; OR= 1.358, 95%CI: 1.039-1.774, P= 0.025, respectively). Conversely, the haplotype "CT" of TNIP1 (rs7708392-rs10036748) may act as a genetic protective factor for gastric carcinoma (adjusted OR= 0.731, 95%CI: 0.552-0.970, P= 0.030). Our results are the first to suggest that genetic variation in TNIP1 gene is associated with gastric carcinoma, though, this finding must be confirmed in other populations with larger sample size.

Indexed as

Polymorphism, Single NucleotideAdultAgedAllelesAsian PeopleCarcinomaCase-Control StudiesChinaDNA-Binding ProteinsFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLinkage DisequilibriumDNA-Binding ProteinsTNIP1 protein, humancase-control studygastric carcinomasingle nucleotide polymorphisms (SNPs)TNF-α-induced protein 3-interacting protein 1 (TNIP1)

Identifiers

PMID27250029
PMCPMC5130023

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.