Evidence map›Paper›PMID 27249803›Full record

ArticlePloS one2016

Profile of Class I Histone Deacetylases (HDAC) by Human Dendritic Cells after Alcohol Consumption and In Vitro Alcohol Treatment and Their Implication in Oxidative Stress: Role of HDAC Inhibitors Trichostatin A and Mocetinostat.

Marisela Agudelo, Gloria Figueroa, Tiyash Parira, Adriana Yndart, Karla Muñoz, Venkata Atluri, Thangavel Samikkannu, Madhavan P Nair

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Marisela AgudeloDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Gloria FigueroaDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Tiyash PariraDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Adriana YndartDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Karla MuñozDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Venkata AtluriDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Thangavel SamikkannuDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Madhavan P NairDepartment of Immunology, Herbert Wertheim College of Medicine, Florida International University, Miami, FL, United States of America.
Florida International University · US

Funding

Cocaine in the Neuropathogenesis of HIV infection: Role of HDAC2R01DA034547 · NIDA · FLORIDA INTERNATIONAL UNIVERSITY · PI NAIR, MADHAVAN P. · 2013 to 2018
$1.8M
EtOH-induced Immunomodulation: Role of Histone Deacetylases and Cannabinoid GenesR00AA021264 · NIAAA · FLORIDA INTERNATIONAL UNIVERSITY · PI AGUDELO, MARISELA · 2015 to 2017
$735k
EtOH-induced Immunomodulation: Role of Histone Deacetylases and Cannabinoid GenesK99AA021264 · NIAAA · FLORIDA INTERNATIONAL UNIVERSITY · PI AGUDELO, MARISELA · 2013 to 2014
$176k
NIAAA NIH HHS K99 AA021264NIAAA NIH HHS R00 AA021264NIDA NIH HHS R01 DA034547
6 · The paper itself

Abstract

Epigenetic mechanisms have been shown to play a role in alcohol use disorders (AUDs) and may prove to be valuable therapeutic targets. However, the involvement of histone deacetylases (HDACs) on alcohol-induced oxidative stress of human primary monocyte-derived dendritic cells (MDDCs) has not been elucidated. In the current study, we took a novel approach combining ex vivo, in vitro and in silico analyses to elucidate the mechanisms of alcohol-induced oxidative stress and role of HDACs in the periphery. ex vivo and in vitro analyses of alcohol-modulation of class I HDACs and activity by MDDCs from self-reported alcohol users and non-alcohol users was performed. Additionally, MDDCs treated with alcohol were assessed using qRT-PCR, western blot, and fluorometric assay. The functional effects of alcohol-induce oxidative stress were measured in vitro using PCR array and in silico using gene expression network analysis. Our findings show, for the first time, that MDDCs from self-reported alcohol users have higher levels of class I HDACs compare to controls and alcohol treatment in vitro differentially modulates HDACs expression. Further, HDAC inhibitors (HDACi) blocked alcohol-induction of class I HDACs and modulated alcohol-induced oxidative stress related genes expressed by MDDCs. In silico analysis revealed new target genes and pathways on the mode of action of alcohol and HDACi. Findings elucidating the ability of alcohol to modulate class I HDACs may be useful for the treatment of alcohol-induced oxidative damage and may delineate new potential immune-modulatory mechanisms.

Indexed as

Alcohol DrinkingOxidative StressAntioxidantsBenzamidesDendritic CellsFemaleHistone Deacetylase InhibitorsHistone DeacetylasesHumansHydroxamic AcidsIn Vitro TechniquesMalePyrimidinesReactive Oxygen SpeciesAntioxidantsBenzamidesHistone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsmocetinostatPyrimidinesReactive Oxygen Speciestrichostatin A

Identifiers

PMID27249803
PMCPMC4889108
OpenAlexW2418189920

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.