Evidence map›Paper›PMID 27248496›Full record

ArticlePloS one2016

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

Joshua M Gilmore, Mihaela E Sardiu, Brad D Groppe, Janet L Thornton, Xingyu Liu, Gerald Dayebgadoh, Charles A Banks, Brian D Slaughter, Jay R Unruh, Jerry L Workman and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Topological data analysis in biomedicine: A review.Journal of biomedical informatics · 2022
    Review
  12. Article
  13. The role of WDR76 protein in human diseases.Bosnian journal of basic medical sciences · 2021
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Joshua M GilmoreStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Mihaela E SardiuStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Brad D GroppeStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Janet L ThorntonStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Xingyu LiuStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Gerald DayebgadohStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Charles A BanksStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Brian D SlaughterStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Jay R UnruhStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Jerry L WorkmanStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Laurence FlorensStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Michael P WashburnStowers Institute for Medical Research, Kansas City, MO, 64110, United States of America.
Stowers Institute for Medical Research · USUniversity of Kansas Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteins that respond to DNA damage play critical roles in normal and diseased states in human biology. Studies have suggested that the S. cerevisiae protein CMR1/YDL156w is associated with histones and is possibly associated with DNA repair and replication processes. Through a quantitative proteomic analysis of affinity purifications here we show that the human homologue of this protein, WDR76, shares multiple protein associations with the histones H2A, H2B, and H4. Furthermore, our quantitative proteomic analysis of WDR76 associated proteins demonstrated links to proteins in the DNA damage response like PARP1 and XRCC5 and heterochromatin related proteins like CBX1, CBX3, and CBX5. Co-immunoprecipitation studies validated these interactions. Next, quantitative imaging studies demonstrated that WDR76 was recruited to laser induced DNA damage immediately after induction, and we compared the recruitment of WDR76 to laser induced DNA damage to known DNA damage proteins like PARP1, XRCC5, and RPA1. In addition, WDR76 co-localizes to puncta with the heterochromatin proteins CBX1 and CBX5, which are also recruited to DNA damage but much less intensely than WDR76. This work demonstrates the chromatin and DNA damage protein associations of WDR76 and demonstrates the rapid response of WDR76 to laser induced DNA damage.

Indexed as

DNA DamageCell Cycle ProteinsChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA-Binding ProteinsHEK293 CellsHeterochromatinHumansCBX1 protein, humanCBX5 protein, humanCell Cycle ProteinsChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA-Binding ProteinsHeterochromatinWDR76 protein, human

Identifiers

PMID27248496
PMCPMC4889050
OpenAlexW2410908789

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.