Evidence map›Paper›PMID 27247418›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Multidimensional structure-function relationships in human β-cardiac myosin from population-scale genetic variation.

Julian R Homburger, Eric M Green, Colleen Caleshu, Margaret S Sunitha, Rebecca E Taylor, Kathleen M Ruppel, Raghu Prasad Rao Metpally, Steven D Colan, Michelle Michels, Sharlene M Day and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
11.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 128 citations in OpenAlex.

  1. Article
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  8. Review
  9. Molecular mechanisms and intervention approaches of heart failure (Review).International journal of molecular medicine · 2025
    Review
  10. Review
  11. Biochemistry and biophysics reports · 2024
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. MYH7 in cardiomyopathy and skeletal muscle myopathy.Molecular and cellular biochemistry · 2024
    Review
  17. Article
  18. Age and Sex Differences in the Genetics of Cardiomyopathy.Journal of cardiovascular translational research · 2023
    Article
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 4 countries.

Julian R HomburgerDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305;
Eric M GreenMyoKardia, Inc., South San Francisco, CA 94080;
Colleen CaleshuStanford Center for Inherited Cardiovascular Disease, Stanford University, Stanford, CA 94305;
Margaret S SunithaInstitute for Stem Cell Biology and Regenerative Medicine, Bangalore 560065, India;
Rebecca E TaylorDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305;
Kathleen M RuppelDepartment of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305; Department of Pediatrics (Cardiology), Stanford University School of Medicine, Stanford, CA 94305;
Raghu Prasad Rao MetpallyCollaborative Bioinformatics Lab, Geisinger Clinic, Danville, PA 17822;
Steven D ColanDepartment of Cardiology, Boston Children's Hospital, Boston, MA 02115;
Michelle MichelsDepartment of Cardiology, Erasmus Medical Center, 3015 CE Rotterdam, The Netherlands;
Sharlene M DayCardiovascular Division, Department of Internal Medicine, University of Michigan, Ann Arbor, MI 48109;
Iacopo OlivottoReferral Center for Cardiomyopathies, Careggi University Hospital, Florence, Italy 50134;
Carlos D BustamanteDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305; Department of Biomedical Data Sciences, Stanford University, Stanford, CA 94305;
Frederick E DeweyRegeneron Genetics Center, Tarrytown, NY 10591;
Carolyn Y HoCardiovascular Division, Brigham and Women's Hospital, Boston, MA 02115.
James A SpudichInstitute for Stem Cell Biology and Regenerative Medicine, Bangalore 560065, India; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305; jspudich@stanford.edu euan@stanford.edu.
Euan A AshleyDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305; Stanford Center for Inherited Cardiovascular Disease, Stanford University, Stanford, CA 94305; jspudich@stanford.edu euan@stanford.edu.
Stanford University · USInstitute for Stem Cell Biology and Regenerative Medicine · INAzienda Ospedaliero-Universitaria Careggi · ITBoston Children's Hospital · USBrigham and Women's Hospital · USErasmus MC · NLGeisinger Medical Center · USRegeneron (United States) · USUniversity of Michigan–Ann Arbor · US

Funding

Clinically Relevant Genome Variation DatabaseU01HG007436 · NHGRI · STANFORD UNIVERSITY · PI BUSTAMANTE, CARLOS DANIEL, PLON, SHARON E. · 2013 to 2016
$10.5M
Stanford Center for Undiagnosed DiseasesU01HG007708 · NHGRI · STANFORD UNIVERSITY · PI ASHLEY, EUAN A, BERNSTEIN, JONATHAN ADAM · 2014 to 2018
$8.0M
Training in Myocardial Biology at Stanford (TIMBS)T32HL094274 · NHLBI · STANFORD UNIVERSITY · PI Euan A Ashley, Daniel Bernstein · 2010 to 2026
$5.0M
Geisinger eGenonic Medicine (GeM) ProgramU01HG006382 · NHGRI · GEISINGER CLINIC · PI CAREY, DAVID J., WILLIAMS, MARC S. · 2011 to 2014
$4.3M
Biomechanical analysis of sarcomeric mutations that cause early-onset cardiomyopaF32HL123247 · NHLBI · STANFORD UNIVERSITY · PI TAYLOR, REBECCA E. · 2014 to 2016
$122k
NHGRI NIH HHS U01 HG006382NHGRI NIH HHS U01 HG007436NHGRI NIH HHS U01 HG007708NHLBI NIH HHS F32 HL123247NHLBI NIH HHS T32 HL094274
6 · The paper itself

Abstract

Myosin motors are the fundamental force-generating elements of muscle contraction. Variation in the human β-cardiac myosin heavy chain gene (MYH7) can lead to hypertrophic cardiomyopathy (HCM), a heritable disease characterized by cardiac hypertrophy, heart failure, and sudden cardiac death. How specific myosin variants alter motor function or clinical expression of disease remains incompletely understood. Here, we combine structural models of myosin from multiple stages of its chemomechanical cycle, exome sequencing data from two population cohorts of 60,706 and 42,930 individuals, and genetic and phenotypic data from 2,913 patients with HCM to identify regions of disease enrichment within β-cardiac myosin. We first developed computational models of the human β-cardiac myosin protein before and after the myosin power stroke. Then, using a spatial scan statistic modified to analyze genetic variation in protein 3D space, we found significant enrichment of disease-associated variants in the converter, a kinetic domain that transduces force from the catalytic domain to the lever arm to accomplish the power stroke. Focusing our analysis on surface-exposed residues, we identified a larger region significantly enriched for disease-associated variants that contains both the converter domain and residues on a single flat surface on the myosin head described as the myosin mesa. Notably, patients with HCM with variants in the enriched regions have earlier disease onset than patients who have HCM with variants elsewhere. Our study provides a model for integrating protein structure, large-scale genetic sequencing, and detailed phenotypic data to reveal insight into time-shifted protein structures and genetic disease.

Indexed as

Databases, GeneticGenetic VariationModels, MolecularCardiac MyosinsCardiomegalyDeath, Sudden, CardiacFemaleGenetic Diseases, InbornHeart FailureHumansMaleMyosin Heavy ChainsStructure-Activity RelationshipCardiac MyosinsMYH7 protein, humanMyosin Heavy Chainsgenetic burdenhypertrophic cardiomyopathymyosinrare disease genetics

Identifiers

PMID27247418
PMCPMC4914177
OpenAlexW2416999276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.