Evidence map›Paper›PMID 27246713›Full record

ArticleDevelopment (Cambridge, England)2016

Chromatin remodeling enzyme Snf2h regulates embryonic lens differentiation and denucleation.

Shuying He, Saima Limi, Rebecca S McGreal, Qing Xie, Lisa A Brennan, Wanda Lee Kantorow, Juraj Kokavec, Romit Majumdar, Harry Hou, Winfried Edelmann and 7 more

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. A novel frameshift variant inOphthalmic genetics · 2024
    Article
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  9. Article
  10. Article
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  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Epigenetic regulation of retinal development.Epigenetics & chromatin · 2021
    Review
  20. Defect of LSS Disrupts Lens Development in Cataractogenesis.Frontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 4 countries.

Shuying HeDepartment of Ophthalmology & Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Saima LimiDepartment of Ophthalmology & Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Rebecca S McGrealDepartment of Ophthalmology & Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Qing XieDepartment of Ophthalmology & Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Lisa A BrennanDepartment of Biomedical Science, Florida Atlantic University, Boca Raton, FL 33431, USA.
Wanda Lee KantorowDepartment of Biomedical Science, Florida Atlantic University, Boca Raton, FL 33431, USA.
Juraj KokavecDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA First Faculty of Medicine, Charles University, 121 08 Prague, Czech Republic.
Romit MajumdarDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Harry HouDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Winfried EdelmannDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Wei LiuDepartment of Ophthalmology & Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Ruth Ashery-PadanDepartment of Human Molecular Genetics and Biochemistry, Sackler School of Medicine Tel-Aviv University, Ramat Aviv, Tel Aviv 69978, Israel.
Jiri ZavadilDepartment of Pathology and NYU Center for Health Informatics and Bioinformatics, New York University Langone Medical Center, New York, NY 10016, USA Mechanisms of Carcinogenesis Section, International Agency for Research on Cancer, Lyon Cedex 08 69372, France.
Marc KantorowDepartment of Biomedical Science, Florida Atlantic University, Boca Raton, FL 33431, USA.
Arthur I SkoultchiDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Tomas StopkaFirst Faculty of Medicine, Charles University, 121 08 Prague, Czech Republic.
Ales CveklDepartment of Ophthalmology & Visual Sciences and Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA ales.cvekl@einstein.yu.edu.ORCID 0000-0002-3957-789X
Albert Einstein College of Medicine · USFlorida Atlantic University · USCharles University · CZNYU Langone Health · USTel Aviv University · IL

Funding

TRAINING PROGRAM IN CELLULAR &MOLEC. BIOLOGY &GENETICST32GM007491 · NIGMS · YESHIVA UNIVERSITY · PI QUERY, CHARLES C · 1985 to 2021
$17.0M
PAX-6 AS A KEY REGULATOR OF LENS DEVELOPMENTR01EY012200 · NEI · YESHIVA UNIVERSITY · PI CVEKL, ALES · 2000 to 2025
$13.1M
Transcriptional Control of the Mouse aA-crystallin locusR01EY014237 · NEI · YESHIVA UNIVERSITY · PI Ales Cvekl · 2003 to 2026
$11.0M
DNA MISMATCH REPAIR AND CANCER IN MURINE MODELSR01CA076329 · NCI · YESHIVA UNIVERSITY · PI EDELMANN, WINFRIED · 1998 to 2017
$6.9M
IN VIVO ANALYSIS OF MOUSE H1 HISTONE FUNCTIONR01CA079057 · NCI · YESHIVA UNIVERSITY · PI SKOULTCHI, ARTHUR I · 1998 to 2013
$5.4M
Gene regulation of retinal cell differentiationR01EY022645 · NEI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI WEI LIU · 2013 to 2026
$4.6M
Molecular Analysis of Microdissected Human LensesR01EY013022 · NEI · WEST VIRGINIA UNIVERSITY · PI KANTOROW, MARC · 1999 to 2013
$3.8M
Functions of Mammalian H1 Linker Histones in Gene Regulation and DevelopmentR01GM116143 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SKOULTCHI, ARTHUR I · 2015 to 2018
$1.9M
Control of the Erythroid Terminal Differentiation DecisionR01DK096266 · NIDDK · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SKOULTCHI, ARTHUR I · 2012 to 2016
$1.8M
In Vivo Analysis of Mouse H1 Histone FunctionR56CA079057 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SKOULTCHI, ARTHUR I · 2008 to 2008
$250k
NCI NIH HHS R01 CA076329NCI NIH HHS R01 CA079057NCI NIH HHS R56 CA079057NEI NIH HHS R01 EY012200NEI NIH HHS R01 EY013022NEI NIH HHS R01 EY014237NEI NIH HHS R01 EY022645NIDDK NIH HHS R01 DK096266NIGMS NIH HHS R01 GM116143NIGMS NIH HHS T32 GM007491World Health Organization 001
6 · The paper itself

Abstract

Ocular lens morphogenesis is a model for investigating mechanisms of cellular differentiation, spatial and temporal gene expression control, and chromatin regulation. Brg1 (Smarca4) and Snf2h (Smarca5) are catalytic subunits of distinct ATP-dependent chromatin remodeling complexes implicated in transcriptional regulation. Previous studies have shown that Brg1 regulates both lens fiber cell differentiation and organized degradation of their nuclei (denucleation). Here, we employed a conditional Snf2h(flox) mouse model to probe the cellular and molecular mechanisms of lens formation. Depletion of Snf2h induces premature and expanded differentiation of lens precursor cells forming the lens vesicle, implicating Snf2h as a key regulator of lens vesicle polarity through spatial control of Prox1, Jag1, p27(Kip1) (Cdkn1b) and p57(Kip2) (Cdkn1c) gene expression. The abnormal Snf2h(-/-) fiber cells also retain their nuclei. RNA profiling of Snf2h(-/) (-) and Brg1(-/-) eyes revealed differences in multiple transcripts, including prominent downregulation of those encoding Hsf4 and DNase IIβ, which are implicated in the denucleation process. In summary, our data suggest that Snf2h is essential for the establishment of lens vesicle polarity, partitioning of prospective lens epithelial and fiber cell compartments, lens fiber cell differentiation, and lens fiber cell nuclear degradation.

Indexed as

Cell DifferentiationChromatin Assembly and DisassemblyAdenosine TriphosphatasesAnimalsAutophagyCell CompartmentationCell CycleCell NucleusChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA HelicasesEmbryo, MammalianEpithelial CellsFemaleGene Expression Regulation, DevelopmentalHeat Shock Transcription FactorsAdenosine TriphosphatasesChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA HelicasesHeat Shock Transcription FactorsHsf4 protein, mouseNuclear ProteinsPax6 protein, mousePAX6 Transcription FactorSmarca4 protein, mouseSmarca5 protein, mouseTranscription FactorsBrg1CataractDenucleationLensSmarca4Smarca5Snf2hTerminal differentiation

Identifiers

PMID27246713
PMCPMC4920164
OpenAlexW2411842391

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.