Evidence map›Paper›PMID 27246657›Full record

ArticleScientific reports2016

Establishment and application of a real-time loop-mediated isothermal amplification system for the detection of CYP2C19 polymorphisms.

Chao Zhang, Yao Yao, Juan-Li Zhu, Si-Nong Zhang, Shan-Shan Zhang, Hua Wei, Wen-Li Hui, Ya-Li Cui

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chao ZhangCollege of Life Sciences, Northwest University, Xi'an, 710069, China.
Yao YaoNational Engineering Research Center for Miniaturized Detection Systems, Xi'an, 710069, China.
Juan-Li ZhuNational Engineering Research Center for Miniaturized Detection Systems, Xi'an, 710069, China.
Si-Nong ZhangCollege of Life Sciences, Northwest University, Xi'an, 710069, China.
Shan-Shan ZhangCollege of Life Sciences, Northwest University, Xi'an, 710069, China.
Hua WeiCollege of Life Sciences, Northwest University, Xi'an, 710069, China.
Wen-Li HuiCollege of Life Sciences, Northwest University, Xi'an, 710069, China.
Ya-Li CuiCollege of Life Sciences, Northwest University, Xi'an, 710069, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Single-nucleotide polymorphisms (SNPs) represent the most widespread type of genetic variation (approximately 90%) in the human genome, and the demand to overcome such variation has received more attention now than ever before. The capacity to rapidly assess SNPs that correlate with disease predisposition, drug efficacy and drug toxicity is a key step for the development of personalized medicine. In this work, a rapid one-step SNP detection method, real-time loop-mediated isothermal amplification (RT-LAMP), was first applied for CYP2C19 polymorphisms testing. The optimized method was established with specifically designed primers for target amplification by real-time detection in approximately 30 min under isothermal conditions. RT-LAMP amplified few copies of template to produce significant amounts of product and quantitatively detected human DNA with compatible specificity and sensitivity. The success in the establishment of this RT-LAMP protocol for CYP2C19 polymorphism testing is significant for the extension of this technique for the detection of other SNPs, which will further facilitate the development of personalized medicine.

Indexed as

Polymorphism, Single NucleotideCytochrome P-450 CYP2C19DNA PrimersHumansNucleic Acid Amplification TechniquesPrecision MedicineTemperatureCYP2C19 protein, humanCytochrome P-450 CYP2C19DNA Primers

Identifiers

PMID27246657
PMCPMC4887897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.