Evidence map›Paper›PMID 27246573›Full record

ArticleJournal of bacteriology2016

CodY-Dependent Regulation of Sporulation in Clostridium difficile.

Kathryn L Nawrocki, Adrianne N Edwards, Nadine Daou, Laurent Bouillaut, Shonna M McBride

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 81 citations in OpenAlex.

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  4. Proline Stickland fermentation supportsApplied and environmental microbiology · 2025
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  9. Clostridioides difficile Sporulation.Advances in experimental medicine and biology · 2024
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  11. Glycine fermentation byInfection and immunity · 2023
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  12. Article
  13. Butyrate enhancesJournal of bacteriology · 2023
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  14. The RgaS-RgaR two-component system promotesbioRxiv : the preprint server for biology · 2023
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  15. Microbiology (Reading, England) · 2023
    Review
  16. Emerging microbes & infections · 2022
    Review
  17. Article
  18. Capturing the environment of the Clostridioides difficile infection cycle.Nature reviews. Gastroenterology & hepatology · 2022
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Kathryn L NawrockiDepartment of Microbiology and Immunology, Emory Antibiotic Resistance Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Adrianne N EdwardsDepartment of Microbiology and Immunology, Emory Antibiotic Resistance Center, Emory University School of Medicine, Atlanta, Georgia, USA.
Nadine DaouDepartment of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, Massachusetts, USA.
Laurent BouillautDepartment of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, Massachusetts, USA.
Shonna M McBrideDepartment of Microbiology and Immunology, Emory Antibiotic Resistance Center, Emory University School of Medicine, Atlanta, Georgia, USA shonna.mcbride@emory.edu.
Emory University · USTufts University · US

Funding

ISOLATION OF EARLY SPORULATION GENESR01GM042219 · NIGMS · TUFTS UNIVERSITY BOSTON · PI SONENSHEIN, ABRAHAM LINCOLN · 1989 to 2015
$5.8M
Host-induced Initiation of Clostridium difficile SporulationR01AI116933 · NIAID · EMORY UNIVERSITY · PI SHONNA M. MCBRIDE · 2015 to 2026
$4.8M
Antimicrobial Resistance and Therapeutic Discovery Training ProgramT32AI106699 · NIAID · EMORY UNIVERSITY · PI Graeme L Conn, Joanna B Goldberg · 2014 to 2026
$2.7M
Molecular Mechanisms of Clostridium difficile Resistance to Innate Host DefensesK01DK087763 · NIDDK · TUFTS UNIVERSITY BOSTON · PI MCBRIDE, SHONNA M. · 2011 to 2015
$713k
Regulation of Clostridium difficile Spore FormationR56AI109526 · NIAID · EMORY UNIVERSITY · PI MCBRIDE, SHONNA M. · 2014 to 2014
$383k
Role of Antimicrobial Resistance in Epidemic Clostridium difficile InfectionsR03DK101870 · NIDDK · EMORY UNIVERSITY · PI MCBRIDE, SHONNA M. · 2014 to 2015
$156k
NIAID NIH HHS R01 AI116933NIAID NIH HHS R56 AI109526NIAID NIH HHS T32 AI106699NIDDK NIH HHS K01 DK087763NIDDK NIH HHS R03 DK101870NIGMS NIH HHS R01 GM042219
6 · The paper itself

Abstract

unlabelledClostridium difficile must form a spore to survive outside the gastrointestinal tract. The factors that trigger sporulation in C. difficile remain poorly understood. Previous studies have suggested that a link exists between nutritional status and sporulation initiation in C. difficile In this study, we investigated the impact of the global nutritional regulator CodY on sporulation in C. difficile strains from the historical 012 ribotype and the current epidemic 027 ribotype. Sporulation frequencies were increased in both backgrounds, demonstrating that CodY represses sporulation in C. difficile The 027 codY mutant exhibited a greater increase in spore formation than the 012 codY mutant. To determine the role of CodY in the observed sporulation phenotypes, we examined several factors that are known to influence sporulation in C. difficile Using transcriptional reporter fusions and quantitative reverse transcription-PCR (qRT-PCR) analysis, we found that two loci associated with the initiation of sporulation, opp and sinR, are regulated by CodY. The data demonstrate that CodY is a repressor of sporulation in C. difficile and that the impact of CodY on sporulation and expression of specific genes is significantly influenced by the strain background. These results suggest that the variability of CodY-dependent regulation is an important contributor to virulence and sporulation in current epidemic isolates. This report provides further evidence that nutritional state, virulence, and sporulation are linked in C. difficile IMPORTANCE: This study sought to examine the relationship between nutrition and sporulation in C. difficile by examining the global nutritional regulator CodY. CodY is a known virulence and nutritional regulator of C. difficile, but its role in sporulation was unknown. Here, we demonstrate that CodY is a negative regulator of sporulation in two different ribotypes of C. difficile We also demonstrate that CodY regulates known effectors of sporulation, Opp and SinR. These results support the idea that nutrient limitation is a trigger for sporulation in C. difficile and that the response to nutrient limitation is coordinated by CodY. Additionally, we demonstrate that CodY has an altered role in sporulation regulation for some strains.

Indexed as

Bacterial ProteinsClostridioides difficileGene Expression Regulation, BacterialMutationRepressor ProteinsSpores, BacterialBacterial ProteinsRepressor Proteins

Identifiers

PMID27246573
PMCPMC4944225
OpenAlexW2418042397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.