Evidence map›Paper›PMID 27246533›Full record

ArticleScientific reports2016

The study of the relation of DNA repair pathway genes SNPs and the sensitivity to radiotherapy and chemotherapy of NSCLC.

Chunbo Wang, Huan Nie, Yiqun Li, Guiyou Liu, Xu Wang, Shijie Xing, Liping Zhang, Xin Chen, Yue Chen, Yu Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 39 citations in OpenAlex.

  1. Trial
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  8. Similar genetic profile in early and late stage urothelial tract cancer.Journal of cancer research and clinical oncology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Chunbo WangSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Huan NieSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Yiqun LiSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Guiyou LiuSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Xu WangDepartment of Radiotherapy, Beijing Miyun County Hospital.
Shijie XingSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Liping ZhangDepartment of Radiotherapy, Affiliated Tumour Hospital of Harbin Medical University.
Xin ChenDepartment of Radiotherapy, Affiliated Tumour Hospital of Harbin Medical University.
Yue ChenSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Yu LiSchool of Life Science and Technology, Harbin Institute of Technology, Heilongjiang, China.
Harbin Institute of Technology · CNHeilongjiang Institute of Technology · CNHarbin Medical University · CNCounty Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To analyze the relation between SNPs in DNA repair pathway-related genes and sensitivity of tumor radio-chemotherapy, 26 SNPs in 20 DNA repair genes were genotyped on 176 patients of NSCLC undertaking radio-chemotherapy treatment. In squamous cell carcinoma (SCC), as the rs2228000, rs2228001 (XPC), rs2273953 (TP73), rs2279744 (MDM2), rs2299939 (PTEN) and rs8178085, rs12334811 (DNA-PKcs) affected the sensitivity to chemotherapy, so did the rs8178085, rs12334811 to radiotherapy. Moreover rs344781, rs2273953 and rs12334811 were related with the survival time of SCC. In general, the "good" genotype GG (rs12334811) showed greater efficacy of radio-chemotherapy and MSF (24 months) on SCC. In adenocarcinoma, as the rs2699887 (PIK3), rs12334811 (DNA-PKcs) influenced the sensitivity to chemotherapy, so did the rs2299939, rs2735343 (PTEN) to radiotherapy. And rs402710, rs80270, rs2279744 and rs2909430 impacted the survival time of the adenocarcinoma patients. Both GG (rs2279744) and AG (rs2909430) showed a shorter survival time (MFS = 6). Additionally, some SNPs such as rs2228000, rs2228001 and rs344781 were found to regulate the expression of DNA repair pathway genes through eQTLs dataset analysis. These results indicate that SNPs in DNA repair pathway genes might regulate the expression and affect the DNA damage repair, and thereby impact the efficacy of radio-chemotherapy and the survival time of NSCLC.

Indexed as

Gene Regulatory NetworksPolymorphism, Single NucleotideAdultAgedAged, 80 and overCarcinoma, Non-Small-Cell LungDNA-Activated Protein KinaseDNA-Binding ProteinsDNA RepairFemaleHumansLung NeoplasmsMaleMiddle AgedNuclear ProteinsProto-Oncogene Proteins c-mdm2DNA-Activated Protein KinaseDNA-Binding ProteinsMDM2 protein, humanNuclear ProteinsPRKDC protein, humanProto-Oncogene Proteins c-mdm2PTEN PhosphohydrolasePTEN protein, humanTP73 protein, humanTumor Protein p73XPC protein, human

Identifiers

PMID27246533
PMCPMC4887885
OpenAlexW2416414259

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.