Evidence map›Paper›PMID 27246313›Full record

ArticleNeuromolecular medicine2017

Promoter Variation and Expression Levels of Inflammatory Genes IL1A, IL1B, IL6 and TNF in Blood of Spinocerebellar Ataxia Type 3 (SCA3) Patients.

Mafalda Raposo, Conceição Bettencourt, Amanda Ramos, Nadiya Kazachkova, João Vasconcelos, Teresa Kay, Jácome Bruges-Armas, Manuela Lima

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Neuromolecular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Trial
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  4. Peripheral inflammation in spinocerebellar ataxia type 3: associations with genetic and clinical manifestations.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Mafalda RaposoDepartment of Biology, University of the Azores, Rua Mãe de Deus, Apartado 1422, 9501-801, Ponta Delgada, Azores, Portugal. mafalda.sb.raposo@uac.pt.
Conceição BettencourtDepartment of Clinical and Experimental Epilepsy, UCL Institute of Neurology, London, UK.
Amanda RamosDepartment of Biology, University of the Azores, Rua Mãe de Deus, Apartado 1422, 9501-801, Ponta Delgada, Azores, Portugal.
Nadiya KazachkovaDepartment of Biology, University of the Azores, Rua Mãe de Deus, Apartado 1422, 9501-801, Ponta Delgada, Azores, Portugal.
João VasconcelosDepartment of Neurology, Hospital do Divino Espírito Santo, Ponta Delgada, Portugal.
Teresa KayDepartment of Clinical Genetics, Hospital of D. Estefania, Lisbon, Portugal.
Jácome Bruges-ArmasInstituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.
Manuela LimaDepartment of Biology, University of the Azores, Rua Mãe de Deus, Apartado 1422, 9501-801, Ponta Delgada, Azores, Portugal.
i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto · PTUniversidade dos Açores · PTHospital de Dona Estefânia · PTHospital do Divino Espírito Santo · PTUniversidade do Porto · PTUniversity College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age at onset in spinocerebellar ataxia type 3 (SCA3/MJD) is incompletely explained by the size of the CAG tract at the ATXN3 gene, implying the existence of genetic modifiers. A role of inflammation in SCA3 has been postulated, involving altered cytokines levels; promoter variants leading to alterations in cytokines expression could influence onset. Using blood from 86 SCA3 patients and 106 controls, this work aimed to analyse promoter variation of four cytokines (IL1A, IL1B, IL6 and TNF) and to investigate the association between variants detected and their transcript levels, evaluated by quantitative PCR. Moreover, the effect of APOE isoforms, known to modulate cytokines, was investigated. Correlations between cytokine variants and onset were tested; the cumulative modifier effects of cytokines and APOE were analysed. Patients carrying the IL6*C allele had a significant earlier onset (4 years in average) than patients carrying the G allele, in agreement with lower mRNA levels produced by IL6*C carriers. The presence of APOE*ɛ2 allele seems to anticipate onset in average 10 years in patients carrying the IL6*C allele; a larger number of patients will be needed to confirm this result. These results highlight the pertinence of conducting further research on the role of cytokines as SCA3 modulators, pointing to the presence of shared mechanisms involving IL6 and APOE.

Indexed as

AdultAge of OnsetAllelesApolipoprotein E2Apolipoproteins EAtaxin-3FemaleGene Expression RegulationGenotypeHumansInflammationInterleukin-1alphaInterleukin-1betaInterleukin-6Machado-Joseph DiseaseMaleApolipoprotein E2Apolipoproteins EAtaxin-3ATXN3 protein, humanIL1A protein, humanIL1B protein, humanIL6 protein, humanInterleukin-1alphaInterleukin-1betaInterleukin-6Repressor ProteinsRNA, MessengerTumor Necrosis Factor-alphaCytokinesMJDmRNA levelsPolyglutamine disease

Identifiers

PMID27246313
OpenAlexW2472458099

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.