Evidence map›Paper›PMID 27242716›Full record

ArticleFrontiers in microbiology2016

The Ability of Microbial Community of Lake Baikal Bottom Sediments Associated with Gas Discharge to Carry Out the Transformation of Organic Matter under Thermobaric Conditions.

Sergei V Bukin, Olga N Pavlova, Andrei Y Manakov, Elena A Kostyreva, Svetlana M Chernitsyna, Elena V Mamaeva, Tatyana V Pogodaeva, Tamara I Zemskaya

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Role of environmental factors in shaping the soil microbiome.Environmental science and pollution research international · 2020
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Sergei V BukinLaboratory of Hydrocarbon Microbiology, Limnological Institute, Russian Academy of Science Irkutsk, Russia.
Olga N PavlovaLaboratory of Hydrocarbon Microbiology, Limnological Institute, Russian Academy of Science Irkutsk, Russia.
Andrei Y ManakovLaboratory of Clathrate Compounds, Nikolaev Institute of Inorganic Chemistry, Russian Academy of Science Novosibirsk, Russia.
Elena A KostyrevaLaboratory of Petroleum Geochemistry, Trofimuk Institute of Petroleum Geology and Geophysics, Russian Academy of Science Novosibirsk, Russia.
Svetlana M ChernitsynaLaboratory of Hydrocarbon Microbiology, Limnological Institute, Russian Academy of Science Irkutsk, Russia.
Elena V MamaevaLaboratory of Hydrocarbon Microbiology, Limnological Institute, Russian Academy of Science Irkutsk, Russia.
Tatyana V PogodaevaLaboratory of Hydrochemistry and Atmosphere Chemistry, Limnological Institute, Russian Academy of Science Irkutsk, Russia.
Tamara I ZemskayaLaboratory of Hydrocarbon Microbiology, Limnological Institute, Russian Academy of Science Irkutsk, Russia.
Limnological Institute · RUInstitute of Petroleum Geology and Geophysics · RUNikolaev Institute of Inorganic Chemistry · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability to compare the composition and metabolic potential of microbial communities inhabiting the subsurface sediment in geographically distinct locations is one of the keys to understanding the evolution and function of the subsurface biosphere. Prospective areas for study of the subsurface biosphere are the sites of hydrocarbon discharges on the bottom of the Lake Baikal rift, where ascending fluxes of gas-saturated fluids and oil from deep layers of bottom sediments seep into near-surface sediment. The samples of surface sediments collected in the area of the Posolskaya Bank methane seep were cultured for 17 months under thermobaric conditions (80°C, 5 MPa) with the addition of complementary organic substrate, and a different composition for the gas phase. After incubation, the presence of intact cells of microorganisms, organic matter transformation and the formation of oil biomarkers was confirmed in the samples, with the addition of Baikal diatom alga Synedra acus detritus, and gas mixture CH4:H2:CO2. Taxonomic assignment of the 16S rRNA sequence data indicates that the predominant sequences in the enrichment were Sphingomonas (55.3%), Solirubrobacter (27.5%) and Arthrobacter (16.6%). At the same time, in heat-killed sediment and in sediment without any additional substrates, which were cultivated in a CH4 atmosphere, no geochemical changes were detected, nor the presence of intact cells and 16S rRNA sequences of Bacteria and Archaea. This data may suggest that the decomposition of organic matter under culturing conditions could be performed by microorganisms from low-temperature sediment layers. One possible explanation of this phenomenon is migration of the representatives of the deep thermophilic community through fault zones in the near surface sediment layers, together with gas-bearing fluids.

Indexed as

gammacereneLake Baikalmethanemicrobial communitysubsurface biosphere

Identifiers

PMID27242716
PMCPMC4861714
OpenAlexW2386038253

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.