Evidence map›Paper›PMID 27242196›Full record

ArticleMetallomics : integrated biometal science2016

pH-regulated metal-ligand switching in the HM loop of ATP7A: a new paradigm for metal transfer chemistry.

Chelsey D Kline, Benjamin F Gambill, Mary Mayfield, Svetlana Lutsenko, Ninian J Blackburn

Open access · bronzeAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Chelsey D KlineInstitute of Environmental Health, Oregon Health and Sciences University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA. blackbni@ohsu.edu.
Benjamin F GambillInstitute of Environmental Health, Oregon Health and Sciences University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA. blackbni@ohsu.edu.
Mary MayfieldInstitute of Environmental Health, Oregon Health and Sciences University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA. blackbni@ohsu.edu.
Svetlana LutsenkoDepartment of Physiology, The Johns Hopkins University, Baltimore, Maryland 21205, USA.
Ninian J BlackburnInstitute of Environmental Health, Oregon Health and Sciences University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA. blackbni@ohsu.edu.
Oregon Health & Science University · USJohns Hopkins University · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
The role of transferrin receptor 2 in iron homeostasisP01GM067166 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI UNGER, VINZENZ · 2003 to 2013
$14.6M
Translational Research Enhancement CoreP30DK089502 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI ZACHOS, NICHOLAS CONSTANTINE · 2011 to 2020
$12.0M
Copper in Neuroendocrine FunctionR01GM115214 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI BLACKBURN, NINIAN J · 2016 to 2019
$1.5M
NIDDK NIH HHS P30 DK089502NIGMS NIH HHS P01 GM067166NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM115214
6 · The paper itself

Abstract

Cuproproteins such as PHM and DBM mature in late endosomal vesicles of the mammalian secretory pathway where changes in vesicle pH are employed for sorting and post-translational processing. Colocation with the P1B-type ATPase ATP7A suggests that the latter is the source of copper and supports a mechanism where selectivity in metal transfer is achieved by spatial colocation of partner proteins in their specific organelles or vesicles. In previous work we have suggested that a lumenal loop sequence located between trans-membrane helices TM1 and TM2 of the ATPase, and containing five histidines and four methionines, acts as an organelle-specific chaperone for metallation of the cuproproteins. The hypothesis posits that the pH of the vesicle regulates copper ligation and loop conformation via a mechanism which involves His to Met ligand switching induced by histidine protonation. Here we report the effect of pH on the HM loop copper coordination using X-ray absorption spectroscopy (XAS), and show via selenium substitution of the Met residues that the HM loop undergoes similar conformational switching to that found earlier for its partner PHM. We hypothesize that in the absence of specific chaperones, HM motifs provide a template for building a flexible, pH-sensitive transfer site whose structure and function can be regulated to accommodate the different active site structural elements and pH environments of its partner proteins.

Indexed as

Amidine-LyasesAmino Acid SequenceCatalytic DomainCation Transport ProteinsCopperCopper-Transporting ATPasesHumansHydrogen-Ion ConcentrationLigandsMixed Function OxygenasesModels, MolecularMolecular ChaperonesProtein BindingProtein Structure, SecondarySequence HomologyX-Ray Absorption SpectroscopyAmidine-LyasesATP7A protein, humanCation Transport ProteinsCopperCopper-Transporting ATPasesLigandsMixed Function OxygenasesMolecular ChaperonesPAM protein, human

Identifiers

PMID27242196
PMCPMC4981546
OpenAlexW2398548639

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.