Evidence map›Paper›PMID 27242166›Full record

Trial reportThe Journal of experimental medicine2016

Human T cell responses to Japanese encephalitis virus in health and disease.

Lance Turtle, Tanushka Bali, Gemma Buxton, Savita Chib, Sajesh Chan, Mohammed Soni, Mohammed Hussain, Heather Isenman, Prachi Fadnis, Manjunatha M Venkataswamy and 17 more

Open access · bronzeAbstract readClinical Trial
In one paragraph

Trial report in The Journal of experimental medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 1 pooled it
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 1 synthesis or guideline pooled it, 104 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Trial
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Human T Cell Responses to Flavivirus Vaccines.European journal of immunology · 2025
    Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Characterization of CD8Journal of virology · 2024
    Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 10 institutions in 3 countries.

Lance TurtleInstitute of Infection and Global Health, University of Liverpool, Liverpool L69 7BE, England, UK Health Protection Research Unit for Emerging and Zoonotic Infections, University of Liverpool, Liverpool L69 7BE, England, UK Tropical and Infectious Disease Unit, Royal Liverpool University Hospital, Liverpool L7 8XP, England, UK lturtle@liverpool.ac.uk paul.klenerman@medawar.ox.ac.uk vijaya@mcbl.iisc.ernet.in.
Tanushka BaliDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Gemma BuxtonInstitute of Infection and Global Health, University of Liverpool, Liverpool L69 7BE, England, UK.
Savita ChibDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Sajesh ChanDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Mohammed SoniDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Mohammed HussainDepartment of Microbiology, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India.
Heather IsenmanInstitute of Infection and Global Health, University of Liverpool, Liverpool L69 7BE, England, UK.
Prachi FadnisDepartment of Neurovirology, National Institute of Mental Health and Neurosciences, Bangalore 560029, India.
Manjunatha M VenkataswamyDepartment of Neurovirology, National Institute of Mental Health and Neurosciences, Bangalore 560029, India.
Vishali SatishkumarDepartment of Microbiology, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India Department of Paediatrics, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India.
Penny LewthwaiteDepartment of Infection and Travel Medicine, University Hospital of St. James, Leeds Teaching Hospitals, National Health Service Trust, Leeds LS9 7TF, England, UK.
Ayako KuriokaNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford OX1 3SY, England, UK.
Srinivasa KrishnaDepartment of Microbiology, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India.
M Veera ShankarDepartment of Paediatrics, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India.
Riyaz AhmedDepartment of Paediatrics, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India.
Ashia BegumDepartment of Microbiology, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India Department of Paediatrics, Vijayanagar Institute of Medical Science Medical College, Bellary 583104, India.
Vasanthapuram RaviDepartment of Neurovirology, National Institute of Mental Health and Neurosciences, Bangalore 560029, India.
Anita DesaiDepartment of Neurovirology, National Institute of Mental Health and Neurosciences, Bangalore 560029, India.
Sutee YoksanCenter for Vaccine Development, Institute of Molecular Biosciences, Mahidol University at Salaya, Bangkok 73170, Thailand.
Stefan FernandezDepartment of Virology, Armed Forces Research Institute of Medical Science, Bangkok 10400, Thailand.
Christian B WillbergNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford OX1 3SY, England, UK.
Henrik N KloverprisNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford OX1 3SY, England, UK.
Christopher ConlonNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford OX1 3SY, England, UK.
Paul KlenermanNuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford OX1 3SY, England, UK lturtle@liverpool.ac.uk paul.klenerman@medawar.ox.ac.uk vijaya@mcbl.iisc.ernet.in.
Vijaya SatchidanandamDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore 560012, India.
Tom SolomonInstitute of Infection and Global Health, University of Liverpool, Liverpool L69 7BE, England, UK Health Protection Research Unit for Emerging and Zoonotic Infections, University of Liverpool, Liverpool L69 7BE, England, UK Walton Center National Health Service Foundation Trust, Liverpool L9 7LJ, England, UK.
Vijayanagara Institute of Medical Sciences · INIndian Institute of Science Bangalore · INNational Institute of Mental Health and Neurosciences · INMedawar Building for Pathogen Research · GBUniversity of Liverpool · GBUniversity of Oxford · GBArmed Forces Research Institute of Medical Science · THHealth Protection Research Unit in Emerging and Zoonotic Infections at University of Liverpool · GBMahidol University · THNational Health Service · GB

Funding

Department of Health IS-HPU-1112-10117Department of Health RP-PG-0108-10048Medical Research Council G116/194NIAID NIH HHS HHSN272201300006CNIAID NIH HHS HHSN272201400028CWellcome Trust 087757/Z/08/ZWellcome Trust 091663Wellcome Trust 109965/Z/15/Z
6 · The paper itself

Abstract

Japanese encephalitis (JE) virus (JEV) is an important cause of encephalitis in children of South and Southeast Asia. However, the majority of individuals exposed to JEV only develop mild symptoms associated with long-lasting adaptive immunity. The related flavivirus dengue virus (DENV) cocirculates in many JEV-endemic areas, and clinical data suggest cross-protection between DENV and JEV. To address the role of T cell responses in protection against JEV, we conducted the first full-breadth analysis of the human memory T cell response using a synthetic peptide library. Ex vivo interferon-γ (IFN-γ) responses to JEV in healthy JEV-exposed donors were mostly CD8(+) and targeted nonstructural (NS) proteins, whereas IFN-γ responses in recovered JE patients were mostly CD4(+) and targeted structural proteins and the secreted protein NS1. Among patients, a high quality, polyfunctional CD4(+) T cell response was associated with complete recovery from JE. T cell responses from healthy donors showed a high degree of cross-reactivity to DENV that was less apparent in recovered JE patients despite equal exposure. These data reveal divergent functional CD4(+) and CD8(+) T cell responses linked to different clinical outcomes of JEV infection, associated with distinct targeting and broad flavivirus cross-reactivity including epitopes from DENV, West Nile, and Zika virus.

Indexed as

Immunologic MemoryAdolescentAdultCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesChildCross ReactionsDengue VirusEncephalitis, JapaneseEncephalitis Virus, JapaneseFemaleHumansInterferon-gammaMaleViral Nonstructural ProteinsIFNG protein, humanInterferon-gammaNS1 protein, FlavivirusViral Nonstructural Proteins

Identifiers

PMID27242166
PMCPMC4925015
OpenAlexW2411033015

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.