Evidence map›Paper›PMID 27242058›Full record

ArticleMicroscopy (Oxford, England)2016

Direct observation of the actin filament by tip-scan atomic force microscopy.

Akihiro Narita, Eiji Usukura, Akira Yagi, Kiyohiko Tateyama, Shogo Akizuki, Mahito Kikumoto, Tomoharu Matsumoto, Yuichiro Maéda, Shuichi Ito, Jiro Usukura

Open access · bronzeAbstract read
In one paragraph

Article in Microscopy (Oxford, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. High-speed AFM reveals subsecond dynamics of cardiac thin filaments upon CaProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Akihiro NaritaStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan JST PRESTO, 4-1-8 Honcho, Kawaguchi, Saitama, 332-0012, Japan narita.akihiro@f.mbox.nagoya-u.ac.jp.
Eiji UsukuraStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Akira YagiR&D Group, Olympus Corporation, 2-3 Kuboyama-cho, Hachioji, Tokyo 192-8512, Japan.
Kiyohiko TateyamaR&D Group, Olympus Corporation, 2-3 Kuboyama-cho, Hachioji, Tokyo 192-8512, Japan.
Shogo AkizukiStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Mahito KikumotoStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Tomoharu MatsumotoStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Yuichiro MaédaStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Shuichi ItoR&D Group, Olympus Corporation, 2-3 Kuboyama-cho, Hachioji, Tokyo 192-8512, Japan.
Jiro UsukuraStructural Biology Research Center, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan.
Nagoya University · JPOlympus (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Actin filaments, the actin-myosin complex and the actin-tropomyosin complex were observed by a tip-scan atomic force microscope (AFM), which was recently developed by Olympus as the AFM part of a correlative microscope. This newly developed AFM uses cantilevers of similar size as stage-scan AFMs to improve substantially the spatial and temporal resolution. Such an approach has previously never been possible by a tip-scan system, in which a cantilever moves in the x, y and z directions. We evaluated the performance of this developed tip-scan AFM by observing the molecular structure of actin filaments and the actin-tropomyosin complex. In the image of the actin filament, the molecular interval of the actin subunits (∼5.5 nm) was clearly observed as stripes. From the shape of the stripes, the polarity of the actin filament was directly determined and the results were consistent with the polarity determined by myosin binding. In the image of the actin-tropomyosin complex, each tropomyosin molecule (∼2 nm in diameter) on the actin filament was directly observed without averaging images of different molecules. Each tropomyosin molecule on the actin filament has never been directly observed by AFM or electron microscopy. Thus, our developed tip-scan AFM offers significant potential in observing purified proteins and cellular structures at nanometer resolution. Current results represent an important step in the development of a new correlative microscope to observe nm-order structures at an acceptable frame rate (∼10 s/frame) by AFM at the position indicated by the fluorescent dye observed under a light microscope.

Indexed as

Actin CytoskeletonAnimalsMicroscopy, Atomic ForceMuscle, SkeletalMyosinsRabbitsTropomyosinMyosinsTropomyosinactin filamentatomic force microscopycorrelative microscopycytoskeletontip-scan AFMtropomyosin

Identifiers

PMID27242058
PMCPMC5895109
OpenAlexW2417570443

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.