Evidence map›Paper›PMID 27240349›Full record

ArticleInternational journal of molecular sciences2016

Transcriptome and Difference Analysis of Fenpropathrin Resistant Predatory Mite, Neoseiulus barkeri (Hughes).

Lin Cong, Fei Chen, Shijiang Yu, Lili Ding, Juan Yang, Ren Luo, Huixia Tian, Hongjun Li, Haoqiang Liu, Chun Ran

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Next-generation biological control: the need for integrating genetics and genomics.Biological reviews of the Cambridge Philosophical Society · 2020
    Review
  6. Article
  7. Antioxidant Role ofFrontiers in physiology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Lin CongCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. conglin@cric.cn.
Fei ChenSinofert Holdings Limited, Henan Branch, Zhengzhou 450000, China. chenfei6034@163.com.
Shijiang YuCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. yushijiang@sinocitrus.com.
Lili DingCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. dinglijiayoua@126.com.
Juan YangCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. yangjuan@sinocitrus.com.
Ren LuoCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. koalox@163.com.
Huixia TianCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. huixia88_1012@163.com.
Hongjun LiCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. lihongjun@cric.cn.
Haoqiang LiuCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. liuhaoqiang@cric.cn.
Chun RanCitrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing 400712, China. ranchun@cric.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several fenpropathrin-resistant predatory mites have been reported. However, the molecular mechanism of the resistance remains unknown. In the present study, the Neoseiulus barkeri (N. barkeri) transcriptome was generated using the Illumina sequencing platform, 34,211 unigenes were obtained, and 15,987 were manually annotated. After manual annotation, attentions were attracted to resistance-related genes, such as voltage-gated sodium channel (VGSC), cytochrome P450s (P450s), and glutathione S-transferases (GSTs). A polymorphism analysis detected two point mutations (E1233G and S1282G) in the linker region between VGSC domain II and III. In addition, 43 putative P450 genes and 10 putative GST genes were identified from the transcriptome. Among them, two P450 genes, NbCYP4EV2 and NbCYP4EZ1, and four GST genes, NbGSTd01, NbGSTd02, NbGSTd03 and NbGSTm03, were remarkably overexpressed 3.64-46.69-fold in the fenpropathrin resistant strain compared to that in the susceptible strain. These results suggest that fenpropathrin resistance in N. barkeri is a complex biological process involving many genetic changes and provide new insight into the N. barkeri resistance mechanism.

Indexed as

Drug ResistanceAcaricidesAcaridaeAnimalsGene Expression ProfilingGene Expression RegulationHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationPhylogenyPyrethrinsSequence Analysis, RNAAcaricidesfenpropathrinPyrethrinsfenpropathrin resistantGSTNeoseiulus barkeriP450transcriptomeVGSC

Identifiers

PMID27240349
PMCPMC4926325

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.