Evidence map›Paper›PMID 27239448›Full record

ArticleFEBS open bio2016

Pre-mRNA splicing is modulated by antifungal drugs in the filamentous fungus Neurospora crassa.

Niege S Mendes, Patricia M Silva, Rafael Silva-Rocha, Nilce M Martinez-Rossi, Antonio Rossi

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Niege S MendesDepartment of Genetics Ribeirão Preto Medical School University of São Paulo Ribeirão Preto SP Brazil.
Patricia M SilvaDepartment of Genetics Ribeirão Preto Medical School University of São Paulo Ribeirão Preto SP Brazil.
Rafael Silva-RochaDepartment of Molecular and Cellular Biology Ribeirão Preto Medical School University of São Paulo Ribeirão Preto SP Brazil.
Nilce M Martinez-RossiDepartment of Genetics Ribeirão Preto Medical School University of São Paulo Ribeirão Preto SP Brazil.
Antonio RossiDepartment of Genetics Ribeirão Preto Medical School University of São Paulo Ribeirão Preto SP Brazil.
Universidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For this study, we sought to identify pre-mRNA processing events modulated by changes in extracellular pH, inorganic phosphate, and antifungal drugs. We examined genes with at least four putative introns whose transcriptional level responded to these effectors. We showed that the intron retention levels of genes encoding asparagine synthetase 2, C6-zinc finger regulator (fluffy), and a farnesyltransferase respond to amphotericin B, ketoconazole, and other effectors. In general, the assayed antifungals promoted the disruption of the structural domains of these proteins probably leading to their inactivation, which emphasize the complexity of the metabolic modulation exerted by antifungal signaling.

Indexed as

alternative splicingamphotericin Basparagine synthetaseintron retentionketoconazoleNeurospora crassaPi regulation

Identifiers

PMID27239448
PMCPMC4821360
OpenAlexW2386478389

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.