Evidence map›Paper›PMID 27239166›Full record

ArticleMultiscale modeling & simulation : a SIAM interdisciplinary journal

A MATHEMATICAL FRAMEWORK FOR EXACT MILESTONING.

David Aristoff, Juan M Bello-Rivas, Ron Elber

Abstract read
In one paragraph

Article in Multiscale modeling & simulation : a SIAM interdisciplinary journal. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Weighted ensemble: Recent mathematical developments.The Journal of chemical physics · 2023
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Value of Temporal Information When Analyzing Reaction Coordinates.Journal of chemical theory and computation · 2020
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

David AristoffDepartment of Mathematics, Colorado State University, Fort Collins, CO.
Juan M Bello-RivasInstitute for Computational Engineering and Sciences, University of Texas at Austin, Austin, TX.
Ron ElberInstitute for Computational Engineering and Sciences, Department of Chemistry, University of Texas at Austin, Austin, TX.

Funding

LONG TIME DYNAMICS OF BIOMOLECULESR01GM059796 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI ELBER, RON · 2000 to 2021
$5.7M
NIGMS NIH HHS R01 GM059796
6 · The paper itself

Abstract

We give a mathematical framework for Exact Milestoning, a recently introduced algorithm for mapping a continuous time stochastic process into a Markov chain or semi-Markov process that can be efficiently simulated and analyzed. We generalize the setting of Exact Milestoning and give explicit error bounds for the error in the Milestoning equation for mean first passage times.

Indexed as

accelerated molecular dynamicslong-time dynamicssemi-Markov processesstationary distribution

Identifiers

PMID27239166
PMCPMC4879838

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.