Evidence map›Paper›PMID 27233998›Full record

ArticleAmerican journal of physiology. Lung cellular and molecular physiology2016

Histone deacetylation contributes to low extracellular superoxide dismutase expression in human idiopathic pulmonary arterial hypertension.

Eva Nozik-Grayck, Crystal Woods, Robert S Stearman, Sujatha Venkataraman, Bradley S Ferguson, Kalin Swain, Russell P Bowler, Mark W Geraci, Kaori Ihida-Stansbury, Kurt R Stenmark and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of physiology. Lung cellular and molecular physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 53 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Pulmonary hypertension.Nature reviews. Disease primers · 2024
    Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Epigenetic Inheritance Underlying Pulmonary Arterial Hypertension.Arteriosclerosis, thrombosis, and vascular biology · 2019
    Review
  19. Effect of Oxidative Stress on the Estrogen-NOS-NO-KOxidative medicine and cellular longevity · 2019
    Review
  20. Insights on the epigenetic mechanisms underlying pulmonary arterial hypertension.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Eva Nozik-GrayckDepartment of Pediatrics, University of Colorado Anschutz Medical Center, Aurora, Colorado; Cardiovascular Pulmonary Research, University of Colorado Anschutz Medical Center, Aurora, Colorado; eva.grayck@ucdenver.edu.
Crystal WoodsDepartment of Pediatrics, University of Colorado Anschutz Medical Center, Aurora, Colorado; Cardiovascular Pulmonary Research, University of Colorado Anschutz Medical Center, Aurora, Colorado;
Robert S StearmanDepartment of Medicine, Indiana University, Indianapolis, Indiana; and.
Sujatha VenkataramanDepartment of Pediatrics, University of Colorado Anschutz Medical Center, Aurora, Colorado;
Bradley S FergusonDepartment of Medicine, University of Colorado Anschutz Medical Center, Aurora, Colorado;
Kalin SwainDepartment of Pediatrics, University of Colorado Anschutz Medical Center, Aurora, Colorado; Cardiovascular Pulmonary Research, University of Colorado Anschutz Medical Center, Aurora, Colorado;
Russell P BowlerDepartment of Medicine, National Jewish Hospital, Denver, Colorado;
Mark W GeraciDepartment of Medicine, Indiana University, Indianapolis, Indiana; and.
Kaori Ihida-StansburyDepartment of Pathology and Laboratory Medicine, University of Pennsylvania, Philadelphia, Pennsylvania;
Kurt R StenmarkDepartment of Pediatrics, University of Colorado Anschutz Medical Center, Aurora, Colorado; Cardiovascular Pulmonary Research, University of Colorado Anschutz Medical Center, Aurora, Colorado; Department of Medicine, University of Colorado Anschutz Medical Center, Aurora, Colorado;
Timothy A McKinseyDepartment of Medicine, University of Colorado Anschutz Medical Center, Aurora, Colorado;
Frederick E DomannDepartment of Radiation Oncology, University of Iowa, Iowa City, Iowa.
University of Colorado Anschutz Medical Campus · USIndiana University – Purdue University Indianapolis · USJewish Hospital · USUniversity of Iowa · USUniversity of Pennsylvania · US

Funding

VRAC and Rho in pulmonary EC proliferationP01HL014985 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI STENMARK, KURT R. · 1985 to 2019
$35.1M
Translational Pulmonary Vascular Biology ProgramT32HL007171 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI Sonia Castro Flores, Tim Lahm · 1985 to 2026
$9.4M
Regulation of Chromatin Signaling in Heart Failure by the BRD4 Bromodomain Protein.R01HL127240 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI MCKINSEY, TIMOTHY, SRIVASTAVA, DEEPAK · 2015 to 2022
$6.4M
Impact of Insufficient Vascular EC-SOD in Pulmonary HypertensionR01HL086680 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI NOZIK, EVA S. · 2008 to 2017
$4.7M
Fibroblasts and Mononuclear Fibrogenic Cells Drive Right Ventricular Pulmonary ArR01HL114887 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI BULL, TODD M, BUTTRICK, PETER N. · 2012 to 2016
$3.4M
Regulation of Cardiac Signaling by Class I Histone DeacetylasesR01HL116848 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI MCKINSEY, TIMOTHY · 2013 to 2021
$3.1M
Prostacyclin Synthase and Receptors in Pulmonary Arterial HypertensionR01HL089508 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI GERACI, MARK W · 2008 to 2011
$684k
Isoform-Selective HDAC Inhibitors for Age-Associated Diastolic DysfunctionR21AG043822 · NIA · UNIVERSITY OF COLORADO DENVER · PI MCKINSEY, TIMOTHY · 2012 to 2013
$414k
Regulation of extracellular superoxide dismutase in human pulmonary arterial hypeR03HL110783 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI NOZIK, EVA S. · 2011 to 2012
$153k
Role of dual-specificity phosphatase 5 (DUSP5) in the regulation of right ventricF32HL124893 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI FERGUSON, BRADLEY S · 2014 to 2015
$77k
NHLBI NIH HHS F32 HL124893NHLBI NIH HHS P01 HL014985NHLBI NIH HHS R01 HL086680NHLBI NIH HHS R01 HL089508NHLBI NIH HHS R01 HL114887NHLBI NIH HHS R01 HL116848NHLBI NIH HHS R01 HL127240NHLBI NIH HHS R03 HL110783NHLBI NIH HHS T32 HL007171NIA NIH HHS R21 AG043822
6 · The paper itself

Abstract

Epigenetic mechanisms, including DNA methylation and histone acetylation, regulate gene expression in idiopathic pulmonary arterial hypertension (IPAH). These mechanisms can modulate expression of extracellular superoxide dismutase (SOD3 or EC-SOD), a key vascular antioxidant enzyme, and loss of vascular SOD3 worsens outcomes in animal models of pulmonary arterial hypertension. We hypothesized that SOD3 gene expression is decreased in patients with IPAH due to aberrant DNA methylation and/or histone deacetylation. We used lung tissue and pulmonary artery smooth muscle cells (PASMC) from subjects with IPAH at transplantation and from failed donors (FD). Lung SOD3 mRNA expression and activity was decreased in IPAH vs. FD. In contrast, mitochondrial SOD (Mn-SOD or SOD2) protein expression was unchanged and intracellular SOD activity was unchanged. Using bisulfite sequencing in genomic lung or PASMC DNA, we found the methylation status of the SOD3 promoter was similar between FD and IPAH. Furthermore, treatment with 5-aza-2'-deoxycytidine did not increase PASMC SOD3 mRNA, suggesting DNA methylation was not responsible for PASMC SOD3 expression. Though total histone deacetylase (HDAC) activity, histone acetyltransferase (HAT) activity, acetylated histones, and acetylated SP1 were similar between IPAH and FD, treatment with two selective class I HDAC inhibitors increased SOD3 only in IPAH PASMC. Class I HDAC3 siRNA also increased SOD3 expression. Trichostatin A, a pan-HDAC inhibitor, decreased proliferation in IPAH, but not in FD PASMC. These data indicate that histone deacetylation, specifically via class I HDAC3, decreases SOD3 expression in PASMC and HDAC inhibitors may protect IPAH in part by increasing PASMC SOD3 expression.

Indexed as

Protein Processing, Post-TranslationalAcetylationAdultAnimalsCells, CulturedEnzyme RepressionFemaleGene ExpressionHistone Deacetylase InhibitorsHistonesHumansHypertension, PulmonaryMaleMiddle AgedMuscle, Smooth, VascularMyocytes, Smooth MuscleHistone Deacetylase InhibitorsHistonesSOD3 protein, humanSuperoxide DismutaseDNA methylationextracellular superoxide dismutasehistone deacetylationidiopathic pulmonary arterial hypertension

Identifiers

PMID27233998
PMCPMC4967185
OpenAlexW2399809628

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.