Evidence map›Paper›PMID 27233781›Full record

ArticleDevelopment genes and evolution2016

Expression patterns of SH3BGR family members in zebrafish development.

Fang Tong, Mingming Zhang, Xiaoling Guo, Hongshun Shi, Li Li, Wen Guan, Haihe Wang, Shulan Yang

Abstract read
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In one paragraph

Article in Development genes and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Fang TongTranslational Medicine Centre, The First Affiliated Hospital, Sun Yat-sen University, No. 58, Zhongshan Road 2nd, Guangzhou, 510080, China.
Mingming ZhangDepartment of Biochemistry, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China.
Xiaoling GuoTranslational Medicine Centre, The First Affiliated Hospital, Sun Yat-sen University, No. 58, Zhongshan Road 2nd, Guangzhou, 510080, China.
Hongshun ShiDepartment of Biochemistry, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China.
Li LiTranslational Medicine Centre, The First Affiliated Hospital, Sun Yat-sen University, No. 58, Zhongshan Road 2nd, Guangzhou, 510080, China.
Wen GuanDepartment of Biochemistry, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China.
Haihe WangDepartment of Biochemistry, Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou, China. wanghaih@mail.sysu.edu.cn.
Shulan YangTranslational Medicine Centre, The First Affiliated Hospital, Sun Yat-sen University, No. 58, Zhongshan Road 2nd, Guangzhou, 510080, China. yangshl3@mail.sysu.edu.cn.
Sun Yat-sen University · CNThe First Affiliated Hospital, Sun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SH3 domain-binding glutamic acid-rich (SH3BGR) gene family is composed of SH3BGR, SH3BGRL, SH3BGRL2, and SH3BGRL3 which encodes a cluster of small thioredoxin-like proteins and shares a Src homology 3 (SH3) domain. However, biological functions of SH3BGR family members are largely elusive. Given that zebrafish (Danio rerio) sh3bgrl, sh3bgrl2, sh3bgrl3, and sh3bgr are evolutionally identical to their corresponding human orthologues, we analyzed the spatiotemporal expression of SH3BGR family members in zebrafish embryonic development stages by in situ hybridization. Our results revealed that except sh3bgrl, other members are all maternally expressed, especially for sh3bgrl3 that is strongly expressed from one-cell stage to juvenile fishes. In situ expression patterns of SH3BGR members are similar in the very early developmental stages, including with commonly strong expression in intestines, olfactory bulbs, and neuromasts for neural system building up. Organ-specific expressions are also demonstrated, of which sh3bgr is uniquely expressed in sarcomere, and sh3bgrl3 in liver. sh3bgrl and sh3bgrl2 are similarly expressed in intestines, notochords, and neuromasts after 12-h post-fertilization of embryos. Eventually, messenger RNAs (mRNAs) of all sh3bgr members are mainly constrained into intestines of juvenile fishes. Collectively, our study clarified the expression patterns of sh3bgr family members in diverse organogenesis in embryonic development and indicates that SH3BGR members may play predominant roles in neural system development and in maintenance of normal function of digestive organs, especially for intestine homeostasis. However, their expression patterns are varied with the development stages and organ types, suggesting that the aberrant expression of these members would result in multiple diseases.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid SequenceAnimalsEmbryo, NonmammalianHomeostasisIntestinesOlfactory BulbSequence Alignmentsrc Homology DomainsZebrafishZebrafish ProteinsAdaptor Proteins, Signal TransducingZebrafish ProteinsDevelopmentDiseasesSH3BGR familyZebrafish

Identifiers

PMID27233781
OpenAlexW2405096296

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.