Evidence map›Paper›PMID 27231705›Full record

ArticleAnnals of clinical and translational neurology2016

Somatic mutations in GLI3 and OFD1 involved in sonic hedgehog signaling cause hypothalamic hamartoma.

Hirotomo Saitsu, Masaki Sonoda, Takefumi Higashijima, Hiroshi Shirozu, Hiroshi Masuda, Jun Tohyama, Mitsuhiro Kato, Mitsuko Nakashima, Yoshinori Tsurusaki, Takeshi Mizuguchi and 4 more

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Article in Annals of clinical and translational neurology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

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23citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Advances in epileptic network findings of hypothalamic hamartomas.Journal of central nervous system disease · 2024
    Review
  6. Clinical and molecular heterogeneity of syndromic hypothalamic hamartoma.American journal of medical genetics. Part A · 2023
    Article
  7. Article
  8. Article
  9. Pulmonary hamartoma in an elk calf.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2023
    Article
  10. Cytogenomic epileptology.Molecular cytogenetics · 2023
    Review
  11. Review
  12. Article
  13. Somatic mosaicism in the diseased brain.Molecular cytogenetics · 2022
    Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
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4 · The record

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5 · Who and what money

Authors and funding

14 authors.

Hirotomo SaitsuDepartment of Human Genetics Yokohama City University Graduate School of Medicine Yokohama 236-0004 Japan; Department of Biochemistry Hamamatsu University School of Medicine Hamamatsu 431-3192 Japan.
Masaki SonodaDepartment of Functional Neurosurgery Epilepsy Center Nishi-Niigata Chuo National Hospital Niigata 950-2085 Japan.
Takefumi HigashijimaDepartment of Functional Neurosurgery Epilepsy Center Nishi-Niigata Chuo National Hospital Niigata 950-2085 Japan.
Hiroshi ShirozuDepartment of Functional Neurosurgery Epilepsy Center Nishi-Niigata Chuo National Hospital Niigata 950-2085 Japan.
Hiroshi MasudaDepartment of Functional Neurosurgery Epilepsy Center Nishi-Niigata Chuo National Hospital Niigata 950-2085 Japan.
Jun TohyamaDepartment of Child Neurology Nishi-Niigata Chuo National Hospital Niigata 950-2085 Japan.
Mitsuhiro KatoDepartment of Pediatrics Showa University School of Medicine Tokyo 142-8666 Japan.
Mitsuko NakashimaDepartment of Human Genetics Yokohama City University Graduate School of Medicine Yokohama 236-0004 Japan.
Yoshinori TsurusakiClinical Research Institute Kanagawa Children's Medical Center Yokohama 232-8555 Japan.
Takeshi MizuguchiDepartment of Human Genetics Yokohama City University Graduate School of Medicine Yokohama 236-0004 Japan.
Satoko MiyatakeDepartment of Human Genetics Yokohama City University Graduate School of Medicine Yokohama 236-0004 Japan.
Noriko MiyakeDepartment of Human Genetics Yokohama City University Graduate School of Medicine Yokohama 236-0004 Japan.
Shigeki KameyamaDepartment of Functional Neurosurgery Epilepsy Center Nishi-Niigata Chuo National Hospital Niigata 950-2085 Japan.
Naomichi MatsumotoDepartment of Human Genetics Yokohama City University Graduate School of Medicine Yokohama 236-0004 Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveHypothalamic hamartoma (HH) is a congenital anomalous brain tumor. Although most HHs are found without any other systemic features, HH is observed in syndromic disorders such as Pallister-Hall syndrome (PHS) and oral-facial-digital syndrome (OFD). Here, we explore the possible involvement of somatic mutations in HH.

methodsWe analyzed paired blood and hamartoma samples from 18 individuals, including three with digital anomalies, by whole-exome sequencing. Detected somatic mutations were validated by Sanger sequencing and deep sequencing of target amplicons. The effect of GLI3 mutations on its transcriptional properties was evaluated by luciferase assays using reporters containing eight copies of the GLI-binding site and a mutated control sequence disrupting GLI binding.

resultsWe found hamartoma-specific somatic truncation mutations in GLI3 and OFD1, known regulators of sonic hedgehog (Shh) signaling, in two and three individuals, respectively. Deep sequencing of amplicons covering the mutations showed mutant allele rates of 7-54%. Somatic mutations in OFD1 at Xp22 were found only in male individuals. Potential pathogenic somatic mutations in UBR5 and ZNF263 were also identified in each individual. Germline nonsense mutations in GLI3 and OFD1 were identified in each individual with PHS and OFD type I in our series, respectively. The truncated GLI3 showed stronger repressor activity than the wild-type protein. We did not detect somatic mutations in the remaining 9 individuals.

interpretationOur data indicate that a spectrum of human disorders can be caused by lesion-specific somatic mutations, and suggest that impaired Shh signaling is one of the pathomechanisms of HH.

Identifiers

PMID27231705
PMCPMC4863748

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.