Evidence map›Paper›PMID 27231347›Full record

ArticleThe Journal of biological chemistry2016

O-Linked N-Acetylglucosamine (O-GlcNAc) Transferase and O-GlcNAcase Interact with Mi2β Protein at the Aγ-Globin Promoter.

Zhen Zhang, Flávia C Costa, Ee Phie Tan, Nathan Bushue, Luciano DiTacchio, Catherine E Costello, Mark E McComb, Stephen A Whelan, Kenneth R Peterson, Chad Slawson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Dissecting OGT's TPR domain to identify determinants of cellular function.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Article
  3. Article
  4. Regulation of Liver Regeneration by Hepatocyte O-GlcNAcylation in Mice.Cellular and molecular gastroenterology and hepatology · 2022
    Article
  5. Review
  6. Review
  7. Article
  8. Catalytic deficiency of O-GlcNAc transferase leads to X-linked intellectual disability.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  9. Article
  10. The Journal of biological chemistry · 2019
    Article
  11. Review
  12. Article
  13. Article
  14. SustainedThe Journal of biological chemistry · 2017
    Article
  15. Fatty acid synthase inhibits theThe Journal of biological chemistry · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Zhen ZhangFrom the Department of Biochemistry and Molecular Biology.
Flávia C CostaIntelligeneDx Cancer Genomics, Olathe, Kansas 66061.
Ee Phie TanFrom the Department of Biochemistry and Molecular Biology.
Nathan BushueFrom the Department of Biochemistry and Molecular Biology.
Luciano DiTacchioPharmacology, Toxicology and Therapeutics.
Catherine E CostelloDepartment of Biochemistry and Center for Biomedical Mass Spectrometry, Boston University School of Medicine, Boston, Massachusetts 02118, and.
Mark E McCombDepartment of Biochemistry and Center for Biomedical Mass Spectrometry, Boston University School of Medicine, Boston, Massachusetts 02118, and.
Stephen A WhelanDepartment of Biochemistry and Center for Biomedical Mass Spectrometry, Boston University School of Medicine, Boston, Massachusetts 02118, and.
Kenneth R PetersonFrom the Department of Biochemistry and Molecular Biology, Anatomy and Cell Biology, and Cancer Center, Institute for Reproductive Health and Regenerative Medicine, and kpeterson@kumc.edu.
Chad SlawsonFrom the Department of Biochemistry and Molecular Biology, Cancer Center, Institute for Reproductive Health and Regenerative Medicine, and Alzheimer's Disease Center, University of Kansas Medical Center, Kansas City, Kansas 66160, cslawson@kumc.edu.
University of Kansas Medical Center · USBoston University · USInstitute for Reproductive Health · US

Funding

Transgenic and Gener-Targeting CoreP20GM104936 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI SAADI, IRFAN · 2012 to 2016
$10.9M
Mass Spectrometry Resource for Biology and MedicineP41GM104603 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI COSTELLO, CATHERINE E. · 2012 to 2017
$10.4M
Mechanisms of HbF Activation by Non-deletional HPFHR01HL111264 · NHLBI · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R · 2013 to 2016
$1.5M
Regulation of Globin Gene Switching by O-GlcNAc Post-Translational ModificationR01DK100595 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI PETERSON, KENNETH R, SLAWSON, CHAD ERIC · 2014 to 2016
$788k
NHLBI NIH HHS HHSN268201000031CNHLBI NIH HHS R01 HL111264NIDDK NIH HHS R01 DK100595NIGMS NIH HHS P20 GM104936NIGMS NIH HHS P41 GM104603
6 · The paper itself

Abstract

One mode of γ-globin gene silencing involves a GATA-1·FOG-1·Mi2β repressor complex that binds to the -566 GATA site relative to the (A)γ-globin gene cap site. However, the mechanism of how this repressor complex is assembled at the -566 GATA site is unknown. In this study, we demonstrate that the O-linked N-acetylglucosamine (O-GlcNAc) processing enzymes, O-GlcNAc-transferase (OGT) and O-GlcNAcase (OGA), interact with the (A)γ-globin promoter at the -566 GATA repressor site; however, mutation of the GATA site to GAGA significantly reduces OGT and OGA promoter interactions in β-globin locus yeast artificial chromosome (β-YAC) bone marrow cells. When WT β-YAC bone marrow cells are treated with the OGA inhibitor Thiamet-G, the occupancy of OGT, OGA, and Mi2β at the (A)γ-globin promoter is increased. In addition, OGT and Mi2β recruitment is increased at the (A)γ-globin promoter when γ-globin becomes repressed in postconception day E18 human β-YAC transgenic mouse fetal liver. Furthermore, we show that Mi2β is modified with O-GlcNAc, and both OGT and OGA interact with Mi2β, GATA-1, and FOG-1. Taken together, our data suggest that O-GlcNAcylation is a novel mechanism of γ-globin gene regulation mediated by modulating the assembly of the GATA-1·FOG-1·Mi2β repressor complex at the -566 GATA motif within the promoter.

Indexed as

Response ElementsAnimalsbeta-N-Acetylhexosaminidasesgamma-GlobinsGATA1 Transcription FactorGene SilencingHumansK562 CellsMiceMice, TransgenicN-AcetylglucosaminyltransferasesNuclear ProteinsTranscription Factorsbeta-N-Acetylhexosaminidasesgamma-GlobinsGATA1 protein, humanGata1 protein, mouseGATA1 Transcription Factorhexosaminidase CN-AcetylglucosaminyltransferasesNuclear ProteinsO-GlcNAc transferaseTranscription FactorsZFPM1 protein, humanZfpm1 protein, mouseCHD4FOGGATA transcription factorGlobinO-GlcNAcaseO-GlcNAc-transferaseO-GlcNAcylationO-linked N-acetylglucosamine (O-GlcNAc)post-translational modification (PTM)transcription

Identifiers

PMID27231347
PMCPMC4957047
OpenAlexW2479001750

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.