Evidence map›Paper›PMID 27230471›Full record

ArticleScientific reports2016

Disclosing the essentiality of ribose-5-phosphate isomerase B in Trypanosomatids.

Joana Faria, Inês Loureiro, Nuno Santarém, Pedro Cecílio, Sandra Macedo-Ribeiro, Joana Tavares, Anabela Cordeiro-da-Silva

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Joana FariaParasite Disease Group, Instituto de Biologia Molecular e Celular da Universidade do Porto, Portugal.
Inês LoureiroParasite Disease Group, Instituto de Biologia Molecular e Celular da Universidade do Porto, Portugal.
Nuno SantarémParasite Disease Group, Instituto de Biologia Molecular e Celular da Universidade do Porto, Portugal.
Pedro CecílioParasite Disease Group, Instituto de Biologia Molecular e Celular da Universidade do Porto, Portugal.
Sandra Macedo-RibeiroInstituto de Investigação e Inovação em Saúde, Universidade do Porto, Porto, Portugal.
Joana TavaresParasite Disease Group, Instituto de Biologia Molecular e Celular da Universidade do Porto, Portugal.
Anabela Cordeiro-da-SilvaParasite Disease Group, Instituto de Biologia Molecular e Celular da Universidade do Porto, Portugal.
i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto · PTUniversidade do Porto · PTInstitute of Crystallography · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribose-5-phosphate isomerase (RPI) belongs to the non-oxidative branch of the pentose phosphate pathway, catalysing the inter-conversion of D-ribose-5-phosphate and D-ribulose-5-phosphate. Trypanosomatids encode a type B RPI, whereas humans have a structurally unrelated type A, making RPIB worthy of exploration as a potential drug target. Null mutant generation in Leishmania infantum was only possible when an episomal copy of RPIB gene was provided, and the latter was retained both in vitro and in vivo in the absence of drug pressure. This suggests the gene is essential for parasite survival. Importantly, the inability to remove the second allele of RPIB gene in sKO mutants complemented with an episomal copy of RPIB carrying a mutation that abolishes isomerase activity suggests the essentiality is due to its metabolic function. In vitro, sKO promastigotes exhibited no defect in growth, metacyclogenesis or macrophage infection, however, an impairment in intracellular amastigotes' replication was observed. Additionally, mice infected with sKO mutants rescued by RPIB complementation had a reduced parasite burden in the liver. Likewise, Trypanosoma brucei is resistant to complete RPIB gene removal and mice infected with sKO mutants showed prolonged survival upon infection. Taken together our results genetically validate RPIB as a potential drug target in trypanosomatids.

Indexed as

Genes, EssentialAldose-Ketose IsomerasesAmino Acid SequenceAnimalsAntiprotozoal AgentsDisease Models, AnimalGene DeletionGene ExpressionGenetic Complementation TestHumansLeishmania infantumLeishmaniasis, VisceralLife Cycle StagesLiverMicePlasmidsAldose-Ketose IsomerasesAntiprotozoal Agentsblasticidin AProtozoan ProteinsPyrrolidinonesribose-5-phosphateRibosemonophosphatesribosephosphate isomeraseribulose 5-phosphateRibulosephosphates

Identifiers

PMID27230471
PMCPMC4882579
OpenAlexW2396063401

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.