Evidence map›Paper›PMID 27229719›Full record

ArticleThe protein journal2016

Expression Profiles of IGF-1R Gene and Polymorphisms of its Regulatory Regions in Different Pig Breeds.

Yunyun Cheng, Songcai Liu, Xin Zhang, Qingyan Wu, Siming Li, Haoyu Fu, Lijie Dong, Hao Yu, Linlin Hao

Abstract read
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In one paragraph

Article in The protein journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Review
  6. A synonymous mutation inMolecular therapy. Nucleic acids · 2021
    Article
  7. Article
  8. Article
  9. Synonymous Mutations of PorcineFrontiers in cell and developmental biology · 2020
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Yunyun ChengCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Songcai LiuCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Xin ZhangChina-Japan Union Hospital, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Qingyan WuCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Siming LiCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Haoyu FuCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Lijie DongCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Hao YuCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China.
Linlin HaoCollege of Animal Science, Jilin University, 5333 Xi'an Road, Changchun, Jilin, 130062, China. haolinlin@jlu.edu.cn.
Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Insulin like growth factor 1 receptor (IGF-1R) is a candidate gene for growth and carcass traits in regulating animal growth, metabolism and endocrine. It is widely expressed in liver, muscle, bone tissues where the IGF-1R functions as a factor that promotes cell growth. In this study, the protein expression level of IGF-1R gene in liver and muscle tissues of three periods (birth, weaning and adult) of three pig breeds (BamaXiang pigs (BM), Tibetan pigs (TM) and Junmu No.1 pigs (JM)) were tested by western blot. SNPs within the regulatory region of pig IGF-1R gene were detected using direct sequencing and then the genotypes were identified through AS-PCR approach. Results showed expression profiles of IGF-1R gene between liver and muscle tissues were different and significant differences were also found among pig breeds. In the same time, four SNPs were detected in the regulatory region of IGF-1R gene, among which the genotype frequency of three (g.-1468G > C, g.-1192 C > T and g.330,424 C > T) were significantly different among the pig breeds. BM tended to heterozygous (GC/CT) of the anterior two loci, while TM and JM preferred the other two homozygotes respectively. For the g.330,424 C > T, all pig breeds were tended to be the heterozygous. In conclusion, the SNPs with different genotype distribution among the three pig breeds may explain the gene expression difference between the different pig breeds.

Indexed as

Polymorphism, Single NucleotideTranscriptomeAnimalsBreedingFemaleGenotypeMaleReceptor, IGF Type 1Regulatory Sequences, Nucleic AcidSwineReceptor, IGF Type 1IGF-1R genePigsPolymorphismsRegulatory regionTissue expression

Identifiers

PMID27229719
OpenAlexW2398563307

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.