Evidence map›Paper›PMID 27229357›Full record

ArticleScientific reports2016

Interconnection of post-transcriptional regulation: The RNA-binding protein Hfq is a novel target of the Lon protease in Pseudomonas aeruginosa.

Lucía Fernández, Elena B M Breidenstein, Patrick K Taylor, Manjeet Bains, César de la Fuente-Núñez, Yuan Fang, Leonard J Foster, Robert E W Hancock

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  7. Specific and Global RNA Regulators inInternational journal of molecular sciences · 2021
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  9. ACS omega · 2020
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  11. Iron Limitation inFrontiers in microbiology · 2020
    Article
  12. Article
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  15. Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Lucía FernándezCentre for Microbial Diseases and Immunity Research, University of British Columbia, 2259 Lower Mall, Vancouver BC, Canada.
Elena B M BreidensteinCentre for Microbial Diseases and Immunity Research, University of British Columbia, 2259 Lower Mall, Vancouver BC, Canada.
Patrick K TaylorCentre for Microbial Diseases and Immunity Research, University of British Columbia, 2259 Lower Mall, Vancouver BC, Canada.
Manjeet BainsCentre for Microbial Diseases and Immunity Research, University of British Columbia, 2259 Lower Mall, Vancouver BC, Canada.
César de la Fuente-NúñezCentre for Microbial Diseases and Immunity Research, University of British Columbia, 2259 Lower Mall, Vancouver BC, Canada.
Yuan FangUniversity of British Columbia, Centre for High-Throughput Biology and Department of Biochemistry &Molecular Biology, Vancouver, BC, V6T 1Z4, Canada.
Leonard J FosterUniversity of British Columbia, Centre for High-Throughput Biology and Department of Biochemistry &Molecular Biology, Vancouver, BC, V6T 1Z4, Canada.
Robert E W HancockCentre for Microbial Diseases and Immunity Research, University of British Columbia, 2259 Lower Mall, Vancouver BC, Canada.
University of British Columbia · CA

Funding

CIHR
6 · The paper itself

Abstract

Besides being a major opportunistic human pathogen, Pseudomonas aeruginosa can be found in a wide range of environments. This versatility is linked to complex regulation, which is achieved through the action of transcriptional regulators, and post-transcriptional regulation by intracellular proteases including Lon. Indeed, lon mutants in this species show defects in motility, biofilm formation, pathogenicity and fluoroquinolone resistance. Here, the proteomic approach stable isotope labeling by amino acids in cell culture (SILAC) was used to search for novel proteolytic targets. One of the proteins that accumulated in the lon mutant was the RNA-binding protein Hfq. Further experiments demonstrated the ability of Lon to degrade Hfq in vitro. Also, overexpression of the hfq gene in the wild-type strain led to partial inhibition of swarming, swimming and twitching motilities, indicating that Hfq accumulation could contribute to the phenotypes displayed by Lon mutants. Hfq overexpression also led to the upregulation of the small regulatory RNA PhrS. Analysis of the phenotypes of strains lacking or overexpressing this sRNA indicated that the Lon protease might be indirectly regulating the levels and activity of sRNAs via Hfq. Overall, this study revealed new links in the complex regulatory chain that controls multicellular behaviours in P. aeruginosa.

Indexed as

Gene Expression Regulation, BacterialProtein Processing, Post-TranslationalBacterial ProteinsHost Factor 1 ProteinPhenotypeProtease LaProteolysisPseudomonas aeruginosaBacterial ProteinsHost Factor 1 ProteinProtease La

Identifiers

PMID27229357
PMCPMC4882532
OpenAlexW2401402628

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.