Evidence map›Paper›PMID 27229172›Full record

ArticleScientific reports2016

Transcriptome analysis of human ageing in male skin shows mid-life period of variability and central role of NF-κB.

Daniel J Haustead, Andrew Stevenson, Vishal Saxena, Fiona Marriage, Martin Firth, Robyn Silla, Lisa Martin, Katharine F Adcroft, Suzanne Rea, Philip J Day and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Dynamic Changes in Gene Expression Through Aging inbioRxiv : the preprint server for biology · 2024
    Article
  7. Development of a biomarker-based platform for comprehensive skin characterization using minimally invasive skin sampling and quantitative real-time PCR.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2024
    Article
  8. Article
  9. Article
  10. The Short- and Long-Term Outcome Priorities of a Western Australian Adult Burn Population.Journal of burn care & research : official publication of the American Burn Association · 2024
    Article
  11. Microneedles: A novel clinical technology for evaluating skin characteristics.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2024
    Article
  12. The quest to define senescence.Frontiers in genetics · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Focus on the Contribution of Oxidative Stress in Skin Aging.Antioxidants (Basel, Switzerland) · 2022
    Review
  19. Minimally invasive skin sampling and transcriptome analysis using microneedles for skin type biomarker research.Skin research and technology : official journal of International Society for Bioengineering and the Skin (ISBS) [and] International Society for Digital Imaging of Skin (ISDIS) [and] International Society for Skin Imaging (ISSI) · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Daniel J HausteadThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Andrew StevensonThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Vishal SaxenaDepartment of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.
Fiona MarriageFaculty of Medicine and Health Sciences, University of Manchester, Manchester, M1 7DN, UK.
Martin FirthFaculty of Medicine, Dentistry and Health Sciences, University of Western Australia, Crawley WA 6009, Australia.
Robyn SillaThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Lisa MartinThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Katharine F AdcroftThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Suzanne ReaThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Philip J DayFaculty of Medicine and Health Sciences, University of Manchester, Manchester, M1 7DN, UK.
Phillip MeltonCentre for Genetic Origins of Health and Disease, University of Western Australia, Crawley WA , Australia 6009.
Fiona M WoodThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Mark W FearThe Fiona Wood Foundation, Perth, WA 6000, Australia.
Fiona Wood FoundationUniversity of Western Australia · AUUniversity of Manchester · GBMassachusetts Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Age is well-known to be a significant factor in both disease pathology and response to treatment, yet the molecular changes that occur with age in humans remain ill-defined. Here, using transcriptome profiling of healthy human male skin, we demonstrate that there is a period of significantly elevated, transcriptome-wide expression changes occurring predominantly in middle age. Both pre and post this period, the transcriptome appears to undergo much smaller, linear changes with increasing age. Functional analysis of the transient changes in middle age suggest a period of heightened metabolic activity and cellular damage associated with NF-kappa-B and TNF signaling pathways. Through meta-analysis we also show the presence of global, tissue independent linear transcriptome changes with age which appear to be regulated by NF-kappa-B. These results suggest that aging in human skin is associated with a critical mid-life period with widespread transcriptome changes, both preceded and proceeded by a relatively steady rate of linear change in the transcriptome. The data provides insight into molecular changes associated with normal aging and will help to better understand the increasingly important pathological changes associated with aging.

Indexed as

AgingTranscriptomeAdultAgedGene Expression ProfilingHumansMaleMiddle AgedNF-kappa BSkinStress, PhysiologicalTransforming Growth Factor beta1Tumor Necrosis Factor-alphaNF-kappa BTGFB1 protein, humanTransforming Growth Factor beta1Tumor Necrosis Factor-alpha

Identifiers

PMID27229172
PMCPMC4882522
OpenAlexW2399513595

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.