Evidence map›Paper›PMID 27228181›Full record

ArticlePloS one2016

MRI Based Localisation and Quantification of Abscesses following Experimental S. aureus Intravenous Challenge: Application to Vaccine Evaluation.

Elizabeth R Allen, Pauline van Diemen, Yuko Yamaguchi, Claudia Lindemann, Elizabeth Soilleux, Christine Rollier, Fergal Hill, Jurgen Schneider, David H Wyllie

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Elizabeth R AllenJenner Institute, Centre for Cellular and Molecular Physiology, University of Oxford, Oxford, United Kingdom.
Pauline van DiemenJenner Institute, Centre for Cellular and Molecular Physiology, University of Oxford, Oxford, United Kingdom.
Yuko YamaguchiJenner Institute, Centre for Cellular and Molecular Physiology, University of Oxford, Oxford, United Kingdom.
Claudia LindemannJenner Institute, Centre for Cellular and Molecular Physiology, University of Oxford, Oxford, United Kingdom.
Elizabeth SoilleuxNuffield Department of Clinical Laboratory Sciences, Radcliffe Department of Medicine, University of Oxford, Oxford, United Kingdom.
Christine RollierOxford Vaccine Group, Department of Paediatrics, University of Oxford, Oxford, United Kingdom.
Fergal HillImaxio SA, Lyon, France.
Jurgen SchneiderBHF Experimental MR Unit, Radcliffe Department of Medicine, University of Oxford Oxford, United Kingdom.
David H WyllieJenner Institute, Centre for Cellular and Molecular Physiology, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-9155-6228
University of Oxford · GBImaxio (France) · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo develop and validate a sensitive and specific method of abscess enumeration and quantification in a preclinical model of Staphylococcus aureus infection.

methodsS. aureus infected murine kidneys were fixed in paraformaldehyde, impregnated with gadolinium, and embedded in agar blocks, which were subjected to 3D magnetic resonance microscopy on a 9.4T MRI scanner. Image analysis techniques were developed, which could identify and quantify abscesses. The result of this imaging was compared with histological examination. The impact of a S. aureus Sortase A vaccination regime was assessed using the technique.

resultsUp to 32 murine kidneys could be imaged in a single MRI run, yielding images with voxels of about 25 μm3. S. aureus abscesses could be readily identified in blinded analyses of the kidneys after 3 days of infection, with low inter-observer variability. Comparison with histological sections shows a striking correlation between the two techniques: all presumptive abscesses identified by MRI were confirmed histologically, and histology identified no abscesses not evident on MRI. In view of this, simulations were performed assuming that both MRI reconstruction, and histology examining all sections of the tissue, were fully sensitive and specific at abscess detection. This simulation showed that MRI provided more sensitive and precise estimates of abscess numbers and volume than histology, unless at least 5 histological sections are taken through the long axis of the kidney. We used the MRI technique described to investigate the impact of a S. aureus Sortase A vaccine.

conclusionPost mortem MRI scanning of large batches of fixed organs has application in the preclinical assessment of S. aureus vaccines.

Indexed as

AbscessKidneyKidney DiseasesMagnetic Resonance ImagingStaphylococcal InfectionsAdministration, IntravenousAnimalsFemaleMiceMice, Inbred BALB CStaphylococcal VaccinesStaphylococcus aureusStaphylococcal Vaccines

Identifiers

PMID27228181
PMCPMC4881890
OpenAlexW2400487153

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.