Evidence map›Paper›PMID 27226590›Full record

ArticleThe Journal of biological chemistry2016

Topology and Structure/Function Correlation of Ring- and Gate-forming Domains in the Dynamic Secretin Complex of Thermus thermophilus.

Ralf Salzer, Edoardo D'Imprima, Vicki A M Gold, Ilona Rose, Moritz Drechsler, Janet Vonck, Beate Averhoff

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Type IV pili ofEcoSal Plus · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ralf SalzerFrom Molecular Microbiology and Bioenergetics, Institute of Molecular Biosciences, Goethe University Frankfurt, 60438 Frankfurt am Main and.
Edoardo D'Imprimathe Department of Structural Biology, Max Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.
Vicki A M Goldthe Department of Structural Biology, Max Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.
Ilona RoseFrom Molecular Microbiology and Bioenergetics, Institute of Molecular Biosciences, Goethe University Frankfurt, 60438 Frankfurt am Main and.
Moritz DrechslerFrom Molecular Microbiology and Bioenergetics, Institute of Molecular Biosciences, Goethe University Frankfurt, 60438 Frankfurt am Main and.
Janet Vonckthe Department of Structural Biology, Max Planck Institute of Biophysics, 60438 Frankfurt am Main, Germany.
Beate AverhoffFrom Molecular Microbiology and Bioenergetics, Institute of Molecular Biosciences, Goethe University Frankfurt, 60438 Frankfurt am Main and averhoff@bio.uni-frankfurt.de.
Goethe University Frankfurt · DEMax Planck Institute of Biophysics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Secretins are versatile outer membrane pores used by many bacteria to secrete proteins, toxins, or filamentous phages; extrude type IV pili (T4P); or take up DNA. Extrusion of T4P and natural transformation of DNA in the thermophilic bacterium Thermus thermophilus requires a unique secretin complex comprising six stacked rings, a membrane-embedded cone structure, and two gates that open and close a central channel. To investigate the role of distinct domains in ring and gate formation, we examined a set of deletion derivatives by cryomicroscopy techniques. Here we report that maintaining the N0 ring in the deletion derivatives led to stable PilQ complexes. Analyses of the variants unraveled that an N-terminal domain comprising a unique βββαβ fold is essential for the formation of gate 2. Furthermore, we identified four βαββα domains essential for the formation of the N2 to N5 rings. Mutant studies revealed that deletion of individual ring domains significantly reduces piliation. The N1, N2, N4, and N5 deletion mutants were significantly impaired in T4P-mediated twitching motility, whereas the motility of the N3 mutant was comparable with that of wild-type cells. This indicates that the deletion of the N3 ring leads to increased pilus dynamics, thereby compensating for the reduced number of pili of the N3 mutant. All mutants exhibit a wild-type natural transformation phenotype, leading to the conclusion that DNA uptake is independent of functional T4P.

Indexed as

Ion Channel GatingProtein ConformationSecretinStructure-Activity RelationshipThermus thermophilusSecretinelectron cryotomographyEMnatural transformationprotein domainprotein foldingring and gate forming domainssecretinstructure/functionThermus thermophilustype IV pili

Identifiers

PMID27226590
PMCPMC4938169
OpenAlexW2363545396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.