Evidence map›Paper›PMID 27226543›Full record

ArticleThe Journal of biological chemistry2016

Structural and Functional Investigations of the Effector Protein LpiR1 from Legionella pneumophila.

Ksenia A Beyrakhova, Karin van Straaten, Lei Li, Michal T Boniecki, Deborah H Anderson, Miroslaw Cygler

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Structural and functional study of Legionella pneumophila effector RavA.Protein science : a publication of the Protein Society · 2021
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ksenia A BeyrakhovaFrom the Department of Biochemistry and.
Karin van StraatenFrom the Department of Biochemistry and.
Lei LiFrom the Department of Biochemistry and.
Michal T BonieckiFrom the Department of Biochemistry and.
Deborah H AndersonCancer Research, Saskatchewan Cancer Agency, University of Saskatchewan, Saskatoon, Saskatchewan S7N 5E5, Canada.
Miroslaw CyglerFrom the Department of Biochemistry and miroslaw.cygler@usask.ca.
University of Saskatchewan · CASaskatchewan Cancer Agency · CA

Funding

CIHR 48370
6 · The paper itself

Abstract

Legionella pneumophila is a causative agent of a severe pneumonia, known as Legionnaires' disease. Legionella pathogenicity is mediated by specific virulence factors, called bacterial effectors, which are injected into the invaded host cell by the bacterial type IV secretion system. Bacterial effectors are involved in complex interactions with the components of the host cell immune and signaling pathways, which eventually lead to bacterial survival and replication inside the mammalian cell. Structural and functional studies of bacterial effectors are, therefore, crucial for elucidating the mechanisms of Legionella virulence. Here we describe the crystal structure of the LpiR1 (Lpg0634) effector protein and investigate the effects of its overexpression in mammalian cells. LpiR1 is an α-helical protein that consists of two similar domains aligned in an antiparallel fashion. The hydrophilic cleft between the domains might serve as a binding site for a potential host cell interaction partner. LpiR1 binds the phosphate group at a conserved site and is stabilized by Mn(2+), Ca(2+), or Mg(2+) ions. When overexpressed in mammalian cells, a GFP-LpiR1 fusion protein is localized in the cytoplasm. Intracellular signaling antibody array analysis revealed small changes in the phosphorylation state of several components of the Akt signaling pathway in HEK293T cells overexpressing LpiR1.

Indexed as

Bacterial Secretion SystemsLegionella pneumophilaLegionnaires' DiseaseSignal TransductionVirulence FactorsHEK293 CellsHumansMetalsProtein DomainsProto-Oncogene Proteins c-aktStructure-Activity RelationshipBacterial Secretion SystemsMetalsProto-Oncogene Proteins c-aktVirulence Factorsbacterial pathogenesiscell signalingcellular localizationcrystal structureLegionella infectionprotein evolutionprotein-protein interaction

Identifiers

PMID27226543
PMCPMC4957058
OpenAlexW2406466598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.