Evidence map›Paper›PMID 27226168›Full record

ArticleG3 (Bethesda, Md.)2016

Genetic Architecture of Resistance to Stripe Rust in a Global Winter Wheat Germplasm Collection.

Peter Bulli, Junli Zhang, Shiaoman Chao, Xianming Chen, Michael Pumphrey

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed.

  1. Article
  2. Article
  3. Genome-wide association mapping for the identification of stripe rust resistance loci in US hard winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Slow stripe rusting in Chinese wheat Jimai 44 conferred by Yr29 in combination with a major QTL on chromosome arm 6AL.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  10. Article
  11. Toward combining qualitative race-specific and quantitative race-nonspecific disease resistance by genomic selection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  12. Genetic Basis of Resistance toPlants (Basel, Switzerland) · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Enhanced stripe rust resistance obtained by combining Yr30 with a widely dispersed, consistent QTL on chromosome arm 4BL.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Peter BulliDepartment of Crop and Soil Sciences, Washington State University, Pullman, Washington 99164-6420.ORCID 0000-0002-7223-7838
Junli ZhangDepartment of Plant Sciences, University of California, Davis, California 95616.
Shiaoman ChaoUSDA-ARS Genotyping Laboratory, Biosciences Research Laboratory, Fargo, North Dakota 58102.
Xianming ChenUSDA-ARS, Wheat Health, Genetics and Quality Research Unit, Washington State University, Pullman, Washington 99164 Department of Plant Pathology, Washington State University, Pullman, Washington 99164.
Michael PumphreyDepartment of Crop and Soil Sciences, Washington State University, Pullman, Washington 99164-6420 m.pumphrey@wsu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Virulence shifts in populations of Puccinia striiformis f. sp. tritici (Pst), the causal pathogen of wheat stripe rust, are a major challenge to resistance breeding. The majority of known resistance genes are already ineffective against current races of Pst, necessitating the identification and introgression of new sources of resistance. Germplasm core collections that reflect the range of genetic and phenotypic diversity of crop species are ideal platforms for examining the genetic architecture of complex traits such as resistance to stripe rust. We report the results of genetic characterization and genome-wide association analysis (GWAS) for resistance to stripe rust in a core subset of 1175 accessions in the National Small Grains Collection (NSGC) winter wheat germplasm collection, based on genotyping with the wheat 9K single nucleotide polymorphism (SNP) iSelect assay and phenotyping of seedling and adult plants under natural disease epidemics in four environments. High correlations among the field data translated into high heritability values within and across locations. Population structure was evident when accessions were grouped by stripe rust reaction. GWAS identified 127 resistance loci that were effective across at least two environments, including 20 with significant genome-wide adjusted P-values. Based on relative map positions of previously reported genes and QTL, five of the QTL with significant genome-wide adjusted P-values in this study represent potentially new loci. This study provides an overview of the diversity of Pst resistance in the NSGC winter wheat germplasm core collection, which can be exploited for diversification of stripe rust resistance in breeding programs.

Indexed as

BasidiomycotaChromosome MappingDisease ResistanceGenome-Wide Association StudyGenotypePlant BreedingPlant DiseasesPolymorphism, Single NucleotideQuantitative Trait LociSeed BankTriticumassociation mappingdisease resistancegenetics of immunityhexaploid wheatQTL-tag SNPyellow rust

Identifiers

PMID27226168
PMCPMC4978880

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.