Evidence map›Paper›PMID 27225459›Full record

ArticleJournal of microbiology (Seoul, Korea)2016

PprM is necessary for up-regulation of katE1, encoding the major catalase of Deinococcus radiodurans, under unstressed culture conditions.

Sun-Wook Jeong, Ho Seong Seo, Min-Kyu Kim, Jong-Il Choi, Heon-Man Lim, Sangyong Lim

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Article in Journal of microbiology (Seoul, Korea), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Development and Regulation of the Extreme Biofilm Formation ofInternational journal of molecular sciences · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. The Novel ncRNA OsiR Positively Regulates Expression ofInternational journal of molecular sciences · 2020
    Article
  8. Review
  9. Article
  10. Knockout ofIndian journal of microbiology · 2017
    Article
  11. PprM, a Cold Shock Domain-Containing Protein fromFrontiers in microbiology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Sun-Wook JeongResearch Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea.
Ho Seong SeoResearch Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea.
Min-Kyu KimResearch Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea.
Jong-Il ChoiDepartment of Biotechnology and Bioengineering, Chonnam National University, Gwangju, 61186, Republic of Korea.
Heon-Man LimDepartment of Biological Sciences, College of Biological Sciences and Biotechnology, Chungnam National University, Daejeon, 34134, Republic of Korea. hmlim@cnu.ac.kr.
Sangyong LimResearch Division for Biotechnology, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea. saylim@kaeri.re.kr.
Korea Atomic Energy Research Institute · KRChonnam National University · KRChungnam National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deinococcus radiodurans is a poly-extremophilic organism, capable of tolerating a wide variety of different stresses, such as gamma/ultraviolet radiation, desiccation, and oxidative stress. PprM, a cold shock protein homolog, is involved in the radiation resistance of D. radiodurans, but its role in the oxidative stress response has not been investigated. In this study, we investigated the effect of pprM mutation on catalase gene expression. pprM disruption decreased the mRNA and protein levels of KatE1, which is the major catalase in D. radiodurans, under normal culture conditions. A pprM mutant strain (pprM MT) exhibited decreased catalase activity, and its resistance to hydrogen peroxide (H2O2) decreased accordingly compared with that of the wild-type strain. We confirmed that RecG helicase negatively regulates katE1 under normal culture conditions. Among katE1 transcriptional regulators, the positive regulator drRRA was not altered in pprM (-), while the negative regulators perR, dtxR, and recG were activated more than 2.5-fold in pprM MT. These findings suggest that PprM is necessary for KatE1 production under normal culture conditions by down-regulation of katE1 negative regulators.

Indexed as

Gene Expression Regulation, EnzymologicUp-RegulationBacterial ProteinsCatalaseCold Shock Proteins and PeptidesDeinococcusGene Expression Regulation, BacterialBacterial ProteinsCatalaseCold Shock Proteins and Peptidescatalase activitycold-shock proteinkatE1PprMROS

Identifiers

PMID27225459
OpenAlexW2405181606

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.