Evidence map›Paper›PMID 27223654›Full record

ArticleMemorias do Instituto Oswaldo Cruz2016

A non-enteric adenovirus A12 gastroenteritis outbreak in Rio de Janeiro, Brazil.

Silvana Augusta Rodrigues Portes, Eduardo de Mello Volotão, Monica Simões Rocha, Maria Cristina Rebelo, Maria da Penha Trindade Pinheiro Xavier, Rosane Maria de Assis, Tatiana Lundgren Rose, Marize Pereira Miagostovich, José Paulo Gagliardi Leite, Filipe Anibal Carvalho-Costa

Abstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  10. Frequency and Impact of Preadmission Digestive Symptoms on Outcome in Severe COVID-19: A Prospective Observational Cohort Study.Indian journal of critical care medicine : peer-reviewed, official publication of Indian Society of Critical Care Medicine · 2021
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  15. Cholera outbreak in Aurangabad, Maharashtra, western India.The Indian journal of medical research · 2019
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  19. Evaluation of skimmed milk flocculation method for virus recovery from tomatoes.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Silvana Augusta Rodrigues PortesFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Eduardo de Mello VolotãoFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Monica Simões RochaFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Maria Cristina RebeloLaboratório Central de Saúde Pública, Laboratório Central de Saúde Pública, Rio de Janeiro RJ , Brasil, Laboratório Central de Saúde Pública, Rio de Janeiro, RJ, Brasil.
Maria da Penha Trindade Pinheiro XavierFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Rosane Maria de AssisFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Tatiana Lundgren RoseFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Marize Pereira MiagostovichFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
José Paulo Gagliardi LeiteFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.
Filipe Anibal Carvalho-CostaFundação Oswaldo Cruz, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro RJ , Brasil, Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Virologia Comparada e Ambiental, Rio de Janeiro, RJ, Brasil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A gastroenteritis outbreak that occurred in 2013 in a low-income community in Rio de Janeiro was investigated for the presence of enteric viruses, including species A rotavirus (RVA), norovirus (NoV), astrovirus (HAstV), bocavirus (HBoV), aichivirus (AiV), and adenovirus (HAdV). Five of nine stool samples (83%) from patients were positive for HAdV, and no other enteric viruses were detected. Polymerase chain reaction products were sequenced and subjected to phylogenetic analysis, which revealed four strains and one strain of non-enteric HAdV-A12 and HAdV-F41, respectively. The HAdV-A12 nucleotide sequences shared 100% nucleotide similarity. Viral load was assessed using a TaqMan real-time PCR assay. Stool samples that were positive for HAdV-A12 had high viral loads (mean 1.9 X 107 DNA copies/g stool). All four patients with HAdV-A12 were < 25 months of age and had symptoms of fever and diarrhoea. Evaluation of enteric virus outbreaks allows the characterisation of novel or unique diarrhoea-associated viruses in regions where RVA vaccination is routinely performed.

Indexed as

AdenoviridaeAdenoviridae InfectionsAdultBrazilChild, PreschoolDiarrheaDisease OutbreaksFecesFemaleGastroenteritisHumansInfantMaleMiddle AgedPhylogenyReal-Time Polymerase Chain ReactionRNA, Viral

Identifiers

PMID27223654
PMCPMC4909040

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.