Evidence map›Paper›PMID 27220986›Full record

ArticleCurrent microbiology2016

Discovery of the New Plant Growth-Regulating Compound LYXLF2 Based on Manipulating the Halogenase in Amycolatopsis orientalis.

Li Xu, Ting Han, Mei Ge, Li Zhu, XiuPing Qian

Abstract read
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In one paragraph

Article in Current microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
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  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Li XuSchool of Pharmacy, Shanghai Jiaotong University, 800 Dongchuan Rd, Shanghai, 200240, China.
Ting HanSchool of Pharmacy, Shanghai Jiaotong University, 800 Dongchuan Rd, Shanghai, 200240, China.
Mei GeShanghai Laiyi Center for Biopharmaceuticals R&D, Shanghai, 201203, China.
Li ZhuSchool of Pharmacy, Shanghai Jiaotong University, 800 Dongchuan Rd, Shanghai, 200240, China. zhulicyh@163.com.
XiuPing QianSchool of Pharmacy, Shanghai Jiaotong University, 800 Dongchuan Rd, Shanghai, 200240, China. qianxp@sjtu.edu.cn.
Shanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Analysis of the Amycolatopsis orientalis HCCB10007 genome revealed new gene clusters involved in natural product biosynthesis that were not associated with the production of known compounds. Halogenases are a type of tailoring enzymes that are usually found within these secondary gene clusters. In this study, we identified an indole-type halometabolite 6-chrolo-1H-indole-3-carboxamide, named LYXLF2, by whole genome mining and metabolic profiling of a flavin-dependent halogenase mutant. LYXLF2 is a new plant growth-regulating compound that promotes root elongation. The results of this study demonstrated that the special gene knock-out/comparative metabolic profiling approach provides a powerful tool for the discovery of novel natural products by genome mining.

Indexed as

ActinomycetalesArabidopsisBacterial ProteinsHydrolasesImidazolesMolecular StructurePhylogenyPlant Growth RegulatorsPlant RootsPlantsBacterial Proteinshaloalkane dehalogenaseHydrolasesImidazolesPlant Growth Regulators

Identifiers

PMID27220986
OpenAlexW2407309222

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.