Evidence map›Paper›PMID 27220316›Full record

ArticleJournal of clinical immunology2016

A Founder Effect of c.257 + 2T > C Mutation in NCF2 Gene Underlies Severe Chronic Granulomatous Disease in Eleven Patients.

Khaoula Ben-Farhat, Imen Ben-Mustapha, Meriem Ben-Ali, Karen Rouault, Saber Hamami, Najla Mekki, Amel Ben-Chehida, Beya Larguèche, Zohra Fitouri, Selim Abdelmoula and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of clinical immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. A Novel Mutation in theFrontiers in pediatrics · 2019
    Article
  7. Observational
  8. Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Khaoula Ben-FarhatLaboratory of Transmission, Control and Immunobiology of Infections (LTCII), LR11IPT02, Institut Pasteur de Tunis, Pasteur, 1002, Tunis-Belvedere, Tunisia.
Imen Ben-MustaphaLaboratory of Transmission, Control and Immunobiology of Infections (LTCII), LR11IPT02, Institut Pasteur de Tunis, Pasteur, 1002, Tunis-Belvedere, Tunisia. imen.benmustapha@pasteur.tn.
Meriem Ben-AliLaboratory of Transmission, Control and Immunobiology of Infections (LTCII), LR11IPT02, Institut Pasteur de Tunis, Pasteur, 1002, Tunis-Belvedere, Tunisia.
Karen RouaultInserm, UMR 1078, Brest, France.
Saber HamamiDepartment of Pediatrics, Fattouma Bourguiba Hospital, 5000, Monastir, Tunisia.
Najla MekkiLaboratory of Transmission, Control and Immunobiology of Infections (LTCII), LR11IPT02, Institut Pasteur de Tunis, Pasteur, 1002, Tunis-Belvedere, Tunisia.
Amel Ben-ChehidaDepartment of Pediatrics, La Rabta Hospital, 1007, Tunis, Tunisia.
Beya LarguècheLaboratory of Transmission, Control and Immunobiology of Infections (LTCII), LR11IPT02, Institut Pasteur de Tunis, Pasteur, 1002, Tunis-Belvedere, Tunisia.
Zohra FitouriDepartment of Emergency and Consultations, Children's Hospital, 1029, Tunis, Tunisia.
Selim AbdelmoulaDepartment of Pediatrics, La Rabta Hospital, 1007, Tunis, Tunisia.
Monia KhemiriDepartment of Pediatrics A, Children's Hospital, 1029, Tunis, Tunisia.
Mohamed-Neji GuedicheDepartment of Pediatrics, Fattouma Bourguiba Hospital, 5000, Monastir, Tunisia.
Samir BoukthirDepartment of Pediatrics C, Children's Hospital, 1029, Tunis, Tunisia.
Sihem BarsaouiDepartment of Pediatrics A, Children's Hospital, 1029, Tunis, Tunisia.
Jalel ChemliDepartment of Pediatrics, Sahloul Hospital, 4011, Sousse, Tunisia.
Mohamed-Ridha BarboucheLaboratory of Transmission, Control and Immunobiology of Infections (LTCII), LR11IPT02, Institut Pasteur de Tunis, Pasteur, 1002, Tunis-Belvedere, Tunisia.
Children's Hospital · TNInstitut Pasteur de Tunis · TNTunis El Manar University · TNHôpital La Rabta · TNHospital Fatuma Bourguiba Monastir · TNHôpital Sahloul · TNInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chronic granulomatous disease (CGD) is the prototypic functional neutrophil disorder caused by genetic defects in one of the five genes encoding the superoxide-generating nicotinamide adenine dinucleotide phosphate (NADPH)-oxidase subunits of phagocytes. Mutations causing the most prevalent form of CGD in western populations are located in the X-linked-CYBB gene. The four remaining autosomal recessive (AR) forms collectively account for one-third of CGD cases. We investigated the clinical and molecular features of eleven patients with CGD from 6 consanguineous families, originating from contiguous regions in the west of Tunisia. The patients' clinical phenotype is characterized by a high incidence of mycobacterial infections. Five out of the eleven patients died despite treatment arguing in favor of a severe clinical form of CGD. These findings correlated with the absence of functional p67phox protein as well as the absence of residual reactive oxygen intermediates (ROI) production. Genetic analysis showed the presence, in all patients, of a unique mutation (c.257 + 2T > C) in NCF2 gene predicted to affect RNA splicing. Segregating analysis using nine polymorphic markers overlapping the NCF2 gene revealed a common haplotype spanning 4.1 Mb. The founder event responsible for this mutation was estimated to have arisen approximately 175 years ago. These findings will facilitate the implementation of preventive approaches through genetic counseling in affected consanguineous families.

Indexed as

AllelesFounder EffectGenetic Predisposition to DiseaseMutationChildChild, PreschoolConsanguinityDNA Mutational AnalysisEnzyme ActivationFemaleGenetic Association StudiesGranulomatous Disease, ChronicHaplotypesHumansInfantMaleNADPH OxidasesNCF2 protein, humanChronic granulomatous diseaseconsanguinityfounder effectNCF2 geneTunisia

Identifiers

PMID27220316
OpenAlexW2408677421

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.