Evidence map›Paper›PMID 27217825›Full record

ArticleComputational intelligence and neuroscience2016

Spike Code Flow in Cultured Neuronal Networks.

Shinichi Tamura, Yoshi Nishitani, Chie Hosokawa, Tomomitsu Miyoshi, Hajime Sawai, Takuya Kamimura, Yasushi Yagi, Yuko Mizuno-Matsumoto, Yen-Wei Chen

Open access · hybridAbstract read
In one paragraph

Article in Computational intelligence and neuroscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 10 citations in OpenAlex.

  1. Simulation of Code Spectrum and Code Flow of Cultured Neuronal Networks.Computational intelligence and neuroscience · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Shinichi TamuraNBL Technovator Co., Ltd., 631 Shindachimakino, Sennan 590-0522, Japan.
Yoshi NishitaniDepartment of Radiology, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Chie HosokawaBiomedical Research Institute, AIST, Ikeda, Osaka 563-8577, Japan.ORCID 0000-0002-0289-4680
Tomomitsu MiyoshiDepartment of Integrative Physiology, Graduate School of Medicine, Osaka University, Suita 565-0871, Japan.
Hajime SawaiCollege of Health and Human Sciences, Osaka Prefecture University, Habikino, Osaka 583-8555, Japan.
Takuya KamimuraNBL Technovator Co., Ltd., 631 Shindachimakino, Sennan 590-0522, Japan.
Yasushi YagiISIR, Osaka University, 8-1 Mihogaoka, Ibaraki City, Osaka 567-0047, Japan.
Yuko Mizuno-MatsumotoGraduate School of Applied Informatics, University of Hyogo, Kobe 650-0047, Japan.
Yen-Wei ChenCollege of Information Science and Engineering, Ritsumeikan University, Kusatsu 525-8577, Japan.
The University of Osaka · JPNBL Technovator Group (Japan) · JPOsaka Prefecture University · JPRitsumeikan University · JPUniversity of Hyogo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We observed spike trains produced by one-shot electrical stimulation with 8 × 8 multielectrodes in cultured neuronal networks. Each electrode accepted spikes from several neurons. We extracted the short codes from spike trains and obtained a code spectrum with a nominal time accuracy of 1%. We then constructed code flow maps as movies of the electrode array to observe the code flow of "1101" and "1011," which are typical pseudorandom sequence such as that we often encountered in a literature and our experiments. They seemed to flow from one electrode to the neighboring one and maintained their shape to some extent. To quantify the flow, we calculated the "maximum cross-correlations" among neighboring electrodes, to find the direction of maximum flow of the codes with lengths less than 8. Normalized maximum cross-correlations were almost constant irrespective of code. Furthermore, if the spike trains were shuffled in interval orders or in electrodes, they became significantly small. Thus, the analysis suggested that local codes of approximately constant shape propagated and conveyed information across the network. Hence, the codes can serve as visible and trackable marks of propagating spike waves as well as evaluating information flow in the neuronal network.

Indexed as

Models, NeurologicalAction PotentialsAnimalsCell Culture TechniquesElectric StimulationEmbryo, MammalianHippocampusNerve NetNeuronsRatsRats, Wistar

Identifiers

PMID27217825
PMCPMC4863084
OpenAlexW2298782086

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.