Evidence map›Paper›PMID 27217104›Full record

ArticleTrends in biochemical sciences2016

Cobalamin's (Vitamin B12) Surprising Function as a Photoreceptor.

Zhuo Cheng, Haruki Yamamoto, Carl E Bauer

Abstract read
In one paragraph

Article in Trends in biochemical sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Protein design accelerates the development and application of optogenetic tools.Computational and structural biotechnology journal · 2025
    Review
  3. Photocobilins integrate BNature communications · 2024
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  4. The blue light-dependent LOV-protein LdaP ofFrontiers in microbiology · 2024
    Article
  5. Redox driven BNature communications · 2023
    Article
  6. Residue alterations within a conserved hydrophobic pocket influence light, oxygen, voltage photoreceptor dark recovery.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2023
    Article
  7. Review
  8. Article
  9. Antivitamins BChemistry (Weinheim an der Bergstrasse, Germany) · 2020
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. A New Facet of Vitamin BAnnual review of biochemistry · 2017
    Review
  17. The Vitamin BmBio · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhuo ChengMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN 47405, USA.
Haruki YamamotoMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN 47405, USA.
Carl E BauerMolecular and Cellular Biochemistry Department, Indiana University, Bloomington, IN 47405, USA. Electronic address: bauer@indiana.edu.
Indiana University Bloomington · US

Funding

Prokaryotic gene regulation by light and oxygenR37GM040941 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BAUER, CARL EUGENE · 2006 to 2016
$5.4M
PROKARYOTIC GENE REGULATION BY LIGHT AND OXYGENR01GM040941 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI BAUER, CARL EUGENE · 1994 to 2020
$3.3M
NIGMS NIH HHS R01 GM040941NIGMS NIH HHS R37 GM040941
6 · The paper itself

Abstract

Cobalamin (Vitamin B12) is an adenosyl- or methyl-donating cofactor for many enzymes, yet many proteins with unknown or nonenzymatic function also contain B12-binding domains. Recent studies show that light excitation energy can promote covalent linkage of B12 to transcription factors with this linkage, affecting gene expression. Thus, B12 now has a newly described regulatory function. Here, our bioinformatics analysis reveals other transcription factors, photoreceptors, kinases, and oxygen sensors that harbor a B12-binding domain that could also regulate activity in response to light absorption.

Indexed as

Light Signal TransductionComputational BiologyMolecular ConformationVitamin B 12Vitamin B 12light-regulated gene regulationphotobiology

Identifiers

PMID27217104
PMCPMC4967030
OpenAlexW2406215274

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.