Evidence map›Paper›PMID 27216162›Full record

ArticleMicrobial cell factories2016

Identification, characterization and molecular adaptation of class I redox systems for the production of hydroxylated diterpenoids.

Christian Görner, Patrick Schrepfer, Veronika Redai, Frank Wallrapp, Bernhard Loll, Wolfgang Eisenreich, Martin Haslbeck, Thomas Brück

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Isolation and Investigation of Natural Rare Earth Metal Chelating Agents FromFrontiers in bioengineering and biotechnology · 2022
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Christian GörnerDivision of Industrial Biocatalysis, Technical University of Munich, Lichtenberg Str. 4, 85748, Garching, Germany.
Patrick SchrepferDivision of Industrial Biocatalysis, Technical University of Munich, Lichtenberg Str. 4, 85748, Garching, Germany.
Veronika RedaiDivision of Industrial Biocatalysis, Technical University of Munich, Lichtenberg Str. 4, 85748, Garching, Germany.
Frank WallrappChair of Bioinformatics, Technical University of Munich, Boltzmannstraße 3, 85748, Garching, Germany.
Bernhard LollDivision of Structural Biology, Institute for Chemistry and Biochemistry, Freie Universität Berlin, Takustr. 6, 14195, Berlin, Germany.
Wolfgang EisenreichChair of Biochemistry, Technical University of Munich, Lichtenberg Str. 4, 85748, Garching, Germany.
Martin HaslbeckChair of Biotechnology, Technical University of Munich, Lichtenbergstr. 4, 85748, Garching, Germany.
Thomas BrückDivision of Industrial Biocatalysis, Technical University of Munich, Lichtenberg Str. 4, 85748, Garching, Germany. brueck@tum.de.
Technical University of Munich · DEFreie Universität Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDe novo production of multi-hydroxylated diterpenoids is challenging due to the lack of efficient redox systems.

resultsIn this study a new reductase/ferredoxin system from Streptomyces afghaniensis (AfR·Afx) was identified, which allowed the Escherichia coli-based production of the trihydroxylated diterpene cyclooctatin, a potent inhibitor of human lysophospholipase. This production system provides a 43-fold increase in cyclooctatin yield (15 mg/L) compared to the native producer. AfR·Afx is superior in activating the cylcooctatin-specific class I P450s CotB3/CotB4 compared to the conventional Pseudomonas putida derived PdR·Pdx model. To enhance the activity of the PdR·Pdx system, the molecular basis for these activity differences, was examined by molecular engineering.

conclusionWe demonstrate that redox system engineering can boost and harmonize the catalytic efficiency of class I hydroxylase enzyme cascades. Enhancing CotB3/CotB4 activities also provided for identification of CotB3 substrate promiscuity and sinularcasbane D production, a functionalized diterpenoid originally isolated from the soft coral Sinularia sp.

Indexed as

Bacterial ProteinsBinding SitesDiterpenesEscherichia coliFerredoxinsHydrogen BondingHydroxylationMolecular Docking SimulationOxidation-ReductionOxidoreductasesPlasmidsProtein Structure, TertiaryStreptomycesSubstrate SpecificityBacterial ProteinscyclooctatinDiterpenesFerredoxinsOxidoreductasesCyclooctatinDiterpene biosynthesisRedox systemSinularcasbane DStreptomyces afghaniensis

Identifiers

PMID27216162
PMCPMC4877809
OpenAlexW2403422401

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.