ArticleJournal of pharmacokinetics and pharmacodynamics2016
Comparing the performance of FOCE and different expectation-maximization methods in handling complex population physiologically-based pharmacokinetic models.
Article in Journal of pharmacokinetics and pharmacodynamics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Population Pharmacokinetics of Selumetinib and Its Metabolite N-desmethyl-selumetinib in Adult Patients With Advanced Solid Tumors and Children With Low-Grade Gliomas.CPT: pharmacometrics & systems pharmacology · 2017Trial
- The evolution of nonlinear mixed effects modeling in pharmacometrics: toward AI-based variational autoencoders.Journal of pharmacokinetics and pharmacodynamics · 2026Article
- Intravenous and Subcutaneous Pharmacokinetic Modeling to Support the Development of Long-Acting Multipurpose Prevention Technology for HIV and Pregnancy.Biomedicines · 2026Article
- RPEM: Randomized Monte Carlo parametric expectation maximization algorithm.CPT: pharmacometrics & systems pharmacology · 2024Article
- Limited sampling strategy and population pharmacokinetic model of mycophenolic acid in pediatric patients with systemic lupus erythematosus: application of a double gamma absorption model with SAEM algorithm.European journal of clinical pharmacology · 2024Article
- A "middle-out approach" for the prediction of human drug disposition from preclinical data using simplified physiologically based pharmacokinetic (PBPK) models.CPT: pharmacometrics & systems pharmacology · 2023Article
- Population PBPK modeling using parametric and nonparametric methods of the Simcyp Simulator, and Bayesian samplers.CPT: pharmacometrics & systems pharmacology · 2022Article
- Metaheuristics for pharmacometrics.CPT: pharmacometrics & systems pharmacology · 2021Review
- Comparing the performance of first-order conditional estimation (FOCE) and different expectation-maximization (EM) methods in NONMEM: real data experience with complex nonlinear parent-metabolite pharmacokinetic model.Journal of pharmacokinetics and pharmacodynamics · 2021Article
- Evaluation of FOCEI and SAEM Estimation Methods in Population Pharmacokinetic Analysis Using NONMEMEuropean journal of drug metabolism and pharmacokinetics · 2018Article
- Performance comparison of first-order conditional estimation with interaction and Bayesian estimation methods for estimating the population parameters and its distribution from data sets with a low number of subjects.BMC medical research methodology · 2017Article
- Developing a Natural History Progression Model for Duchenne Muscular Dystrophy Using the Six-Minute Walk Test.CPT: pharmacometrics & systems pharmacology · 2017Article
Corrections and comments
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Authors and funding
2 authors.
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No grant is acknowledged in the PubMed record.
Abstract
For the purpose of population pharmacometric modeling, a variety of mathematic algorithms are implemented in major modeling software packages to facilitate the maximum likelihood modeling, such as FO, FOCE, Laplace, ITS and EM. These methods are all designed to estimate the set of parameters that maximize the joint likelihood of observations in a given problem. While FOCE is still currently the most widely used method in population modeling, EM methods are getting more popular as the current-generation methods of choice because of their robustness with more complex models and sparse data structures. There are several versions of EM method implementation that are available in public modeling software packages. Although there have been several studies and reviews comparing the performance of different methods in handling relatively simple models, there has not been a dedicated study to compare different versions of EM algorithms in solving complex PBPK models. This study took everolimus as a model drug and simulated PK data based on published results. Three most popular EM methods (SAEM, IMP and QRPEM) and FOCE (as a benchmark reference) were evaluated for their estimation accuracy and converging speed when solving models of increased complexity. Both sparse and rich sampling data structure were tested. We concluded that FOCE was superior to EM methods for simple structured models. For more complex models and/ or sparse data, EM methods are much more robust. While the estimation accuracy was very close across EM methods, the general ranking of speed (fastest to slowest) was: QRPEM, IMP and SAEM. IMP gave the most realistic estimation of parameter standard errors, while under- and over- estimation of standard errors were observed in SAEM and QRPEM methods.
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