Evidence map›Paper›PMID 27214401›Full record

ArticleNature chemical biology2016

An inhibitor of KDM5 demethylases reduces survival of drug-tolerant cancer cells.

Maia Vinogradova, Victor S Gehling, Amy Gustafson, Shilpi Arora, Charles A Tindell, Catherine Wilson, Kaylyn E Williamson, Gulfem D Guler, Pranoti Gangurde, Wanda Manieri and 25 more

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 222 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
222citing papers in PubMed, 1 pooled it
20.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

222 citing papers in PubMed, 1 synthesis or guideline pooled it, 345 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Obesity Disrupts H3K4me3-Mediated Lactate Accumulation and Efferocytosis in Hypoxic Macrophages.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Access to Pyrazolo[1,5-Organic letters · 2026
    Article
  18. Article
  19. Review
  20. Review

162 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 1 institution in 1 country.

Maia VinogradovaGenentech Inc., South San Francisco, California, USA.
Victor S GehlingConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Amy GustafsonGenentech Inc., South San Francisco, California, USA.
Shilpi AroraConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.ORCID 0000-0001-5133-3612
Charles A TindellGenentech Inc., South San Francisco, California, USA.
Catherine WilsonGenentech Inc., South San Francisco, California, USA.
Kaylyn E WilliamsonConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Gulfem D GulerGenentech Inc., South San Francisco, California, USA.
Pranoti GangurdeConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Wanda ManieriConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Jennifer BusbyConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
E Megan FlynnGenentech Inc., South San Francisco, California, USA.
Fei LanConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Hyo-Jin KimGenentech Inc., South San Francisco, California, USA.
Shobu OdateConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Andrea G CochranGenentech Inc., South San Francisco, California, USA.
Yichin LiuGenentech Inc., South San Francisco, California, USA.
Matthew WongchenkoGenentech Inc., South San Francisco, California, USA.
Yibin YangGenentech Inc., South San Francisco, California, USA.
Tommy K CheungGenentech Inc., South San Francisco, California, USA.
Tobias M MaileGenentech Inc., South San Francisco, California, USA.
Ted LauGenentech Inc., South San Francisco, California, USA.
Michael CostaGenentech Inc., South San Francisco, California, USA.
Ganapati V HegdeGenentech Inc., South San Francisco, California, USA.
Erica JacksonGenentech Inc., South San Francisco, California, USA.
Robert PittiGenentech Inc., South San Francisco, California, USA.
David ArnottGenentech Inc., South San Francisco, California, USA.
Christopher BaileyConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Steve BellonConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Richard T CummingsConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Brian K AlbrechtConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Jean-Christophe HarmangeConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
James R KieferGenentech Inc., South San Francisco, California, USA.
Patrick TrojerConstellation Pharmaceuticals, Cambridge, Massachusetts, USA.
Marie ClassonGenentech Inc., South San Francisco, California, USA.
Constellation Pharmaceuticals (United States) · US

Funding

CIHRHoward Hughes Medical Institute
6 · The paper itself

Abstract

The KDM5 family of histone demethylases catalyzes the demethylation of histone H3 on lysine 4 (H3K4) and is required for the survival of drug-tolerant persister cancer cells (DTPs). Here we report the discovery and characterization of the specific KDM5 inhibitor CPI-455. The crystal structure of KDM5A revealed the mechanism of inhibition of CPI-455 as well as the topological arrangements of protein domains that influence substrate binding. CPI-455 mediated KDM5 inhibition, elevated global levels of H3K4 trimethylation (H3K4me3) and decreased the number of DTPs in multiple cancer cell line models treated with standard chemotherapy or targeted agents. These findings show that pretreatment of cancer cells with a KDM5-specific inhibitor results in the ablation of a subpopulation of cancer cells that can serve as the founders for therapeutic relapse.

Indexed as

Antineoplastic AgentsCell SurvivalDose-Response Relationship, DrugDrug Resistance, NeoplasmDrug Screening Assays, AntitumorEnzyme InhibitorsHumansModels, MolecularMolecular StructureNeoplasmsRetinoblastoma-Binding Protein 2Structure-Activity RelationshipAntineoplastic AgentsEnzyme InhibitorsKDM5A protein, humanRetinoblastoma-Binding Protein 2

Identifiers

PMID27214401
OpenAlexW2395554454

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.