Evidence map›Paper›PMID 27213691›Full record

ArticleNature immunology2016

Id2 reinforces TH1 differentiation and inhibits E2A to repress TFH differentiation.

Laura A Shaw, Simon Bélanger, Kyla D Omilusik, Sunglim Cho, James P Scott-Browne, J Philip Nance, John Goulding, Anna Lasorella, Li-Fan Lu, Shane Crotty and 1 more

Abstract read
In one paragraph

Article in Nature immunology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 107 citations in OpenAlex.

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  15. Review
  16. Recruitment and Maintenance of CX3CR1+CD4+ T Cells during Helminth Infection.Journal of immunology (Baltimore, Md. : 1950) · 2024
    Article
  17. Key Functions of the Transcription Factor BCL6 During T-Cell Differentiation.Advances in experimental medicine and biology · 2024
    Review
  18. Article
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Laura A ShawDepartment of Biological Sciences, University of California San Diego, La Jolla, California, USA.
Simon BélangerDivision of Vaccine Discovery, La Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
Kyla D OmilusikDepartment of Biological Sciences, University of California San Diego, La Jolla, California, USA.
Sunglim ChoDepartment of Biological Sciences, University of California San Diego, La Jolla, California, USA.
James P Scott-BrowneDivision of Signaling and Gene Expression, La Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
J Philip NanceDivision of Vaccine Discovery, La Jolla Institute for Allergy &Immunology, La Jolla, California, USA.
John GouldingDepartment of Biological Sciences, University of California San Diego, La Jolla, California, USA.
Anna LasorellaInstitute for Cancer Genetics, Columbia University Medical Center, New York, New York, USA.
Li-Fan LuDepartment of Biological Sciences, University of California San Diego, La Jolla, California, USA.
Shane CrottyDivision of Vaccine Discovery, La Jolla Institute for Allergy &Immunology, La Jolla, California, USA.ORCID 0000-0002-6484-6262
Ananda W GoldrathDepartment of Biological Sciences, University of California San Diego, La Jolla, California, USA.
University of California San Diego · USLa Jolla Institute for Immunology · USColumbia University Irving Medical Center · US

Funding

TF regulation of CD8 and CD4 T cell memory in both systemic and dermal infectionU19AI109976 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI PETERS, BJOERN · 2014 to 2018
$10.5M
T cell maintenance: molecular mediators of the TCR-derived survival signalR01AI067545 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GOLDRATH, ANANDA W · 2006 to 2021
$6.1M
Mechanisms of humoral immunity development and function to the smallpox vaccineR01AI063107 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI CROTTY, SHANE P · 2005 to 2015
$4.4M
Role of microRNAs in regulatory T cell-mediated immunological tolerance and T celR01AI108651 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LU, LI-FAN · 2014 to 2024
$4.0M
T cell maintenance: molecular mediators of T cell differentiation and survivalR37AI067545 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Ananda W Goldrath · 2022 to 2026
$3.0M
FACSAria II Cell SorterS10RR027366 · NCRR · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI CROFT, MICHAEL · 2011 to 2011
$514k
Transcriptional regulation of immunological memoryF31AG043222 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SHAW, LAURA · 2013 to 2016
$135k
NIAID NIH HHS R01 AI063107NIAID NIH HHS R01 AI067545NIAID NIH HHS R01 AI108651NIAID NIH HHS R37 AI067545NIAID NIH HHS U19 AI109976NIA NIH HHS F31 AG043222
6 · The paper itself

Abstract

The differentiation of helper T cells into effector subsets is critical to host protection. Transcription factors of the E-protein and Id families are important arbiters of T cell development, but their role in the differentiation of the TH1 and TFH subsets of helper T cells is not well understood. Here, TH1 cells showed more robust Id2 expression than that of TFH cells, and depletion of Id2 via RNA-mediated interference increased the frequency of TFH cells. Furthermore, TH1 differentiation was blocked by Id2 deficiency, which led to E-protein-dependent accumulation of effector cells with mixed characteristics during viral infection and severely impaired the generation of TH1 cells following infection with Toxoplasma gondii. The TFH cell-defining transcriptional repressor Bcl6 bound the Id2 locus, which provides a mechanism for the bimodal Id2 expression and reciprocal development of TH1 cells and TFH cells.

Indexed as

Cell DifferentiationAnimalsArenaviridae InfectionsBasic Helix-Loop-Helix ProteinsCells, CulturedFemaleGerminal CenterInhibitor of Differentiation Protein 2Lymphocytic choriomeningitis virusMaleMiceMice, Inbred C57BLMice, Inbred CBAMice, TransgenicProtein BindingProto-Oncogene Proteins c-bcl-6Basic Helix-Loop-Helix ProteinsBcl6 protein, mouseIdb2 protein, mouseInhibitor of Differentiation Protein 2Proto-Oncogene Proteins c-bcl-6RNA, Small InterferingTcf3 protein, mouse

Identifiers

PMID27213691
PMCPMC4915968
OpenAlexW2406790975

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.