Evidence map›Paper›PMID 27213359›Full record

SynthesisInternational journal of molecular sciences2016

Integrated Analysis of Expression Profile Based on Differentially Expressed Genes in Middle Cerebral Artery Occlusion Animal Models.

Huaqiang Zhou, Zeting Qiu, Shaowei Gao, Qinchang Chen, Si Li, Wulin Tan, Xiaochen Liu, Zhongxing Wang

Open access · goldAbstract readMeta-AnalysisReview
In one paragraph

Synthesis in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Principles and requirements for stroke recovery science.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2021
    Review
  6. Article
  7. Comparative transcriptome of neurons after oxygen-glucose deprivation: Potential differences in neuroprotection versus reperfusion.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2018
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Huaqiang ZhouDepartment of Anesthesiology, the First Affiliated Hospital of Sun Yat-sen University, Guangzhou 510080, China. liujiaosuan@gmail.com.
Zeting QiuSun Yat-sen University School of Medicine, Sun Yat-sen University, Guangzhou 510080, China. doctorqiuzt@gmail.com.
Shaowei GaoDepartment of Anesthesiology, the First Affiliated Hospital of Sun Yat-sen University, Guangzhou 510080, China. gscfwid@gmail.com.
Qinchang ChenSun Yat-sen University School of Medicine, Sun Yat-sen University, Guangzhou 510080, China. doctorchenqc@gmail.com.
Si LiSun Yat-sen University School of Medicine, Sun Yat-sen University, Guangzhou 510080, China. grace980050@gmail.com.
Wulin TanDepartment of Anesthesiology, the First Affiliated Hospital of Sun Yat-sen University, Guangzhou 510080, China. tanwulin1986@163.com.
Xiaochen LiuSun Yat-sen University School of Medicine, Sun Yat-sen University, Guangzhou 510080, China. lxcsysu@gmail.com.
Zhongxing WangDepartment of Anesthesiology, the First Affiliated Hospital of Sun Yat-sen University, Guangzhou 510080, China. doctorwzx@126.com.
Sun Yat-sen University · CNThe First Affiliated Hospital, Sun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stroke is one of the most common causes of death, only second to heart disease. Molecular investigations about stroke are in acute shortage nowadays. This study is intended to explore a gene expression profile after brain ischemia reperfusion. Meta-analysis, differential expression analysis, and integrated analysis were employed on an eight microarray series. We explored the functions and pathways of target genes in gene ontology (GO) enrichment analysis and constructed a protein-protein interaction network. Meta-analysis identified 360 differentially expressed genes (DEGs) for Mus musculus and 255 for Rattus norvegicus. Differential expression analysis identified 44 DEGs for Mus musculus and 21 for Rattus norvegicus. Timp1 and Lcn2 were overexpressed in both species. The cytokine-cytokine receptor interaction and chemokine signaling pathway were highly enriched for the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway. We have exhibited a global view of the potential molecular differences between middle cerebral artery occlusion (MCAO) animal model and sham for Mus musculus or Rattus norvegicus, including the biological process and enriched pathways in DEGs. This research helps contribute to a clearer understanding of the inflammation process and accurate identification of ischemic infarction stages, which might be transformed into a therapeutic approach.

Indexed as

Gene Expression ProfilingGene Expression RegulationGene OntologyInfarction, Middle Cerebral ArteryAnimalsDisease Models, AnimalHumansMiceOligonucleotide Array Sequence AnalysisRatscytokinesgene expression profilemiddle cerebral artery occlusionstroke

Identifiers

PMID27213359
PMCPMC4881595
OpenAlexW2397203495

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.