Evidence map›Paper›PMID 27211925›Full record

ArticleScientific reports2016

The Fd-GOGAT1 mutant gene lc7 confers resistance to Xanthomonas oryzae pv. Oryzae in rice.

Honglin Chen, Chunrong Li, Liping Liu, Jiying Zhao, Xuzhen Cheng, Guanghuai Jiang, Wenxue Zhai

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

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  10. New Insight into Aspartate Metabolic Pathways inInternational journal of molecular sciences · 2022
    Article
  11. Article
  12. Article
  13. Recent Progress in Rice Broad-Spectrum Disease Resistance.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Honglin ChenInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Chunrong LiInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Liping LiuState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing, 100193, China.
Jiying ZhaoInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Xuzhen ChengNational Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
Guanghuai JiangInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Wenxue ZhaiInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Chinese Academy of Sciences · CNInstitute of Genetics and Developmental Biology · CNChina Agricultural University · CNChinese Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Disease resistance is an important goal of crop improvement. The molecular mechanism of resistance requires further study. Here, we report the identification of a rice leaf color mutant, lc7, which is defective in chlorophyll synthesis and photosynthesis but confers resistance to Xanthomonas oryzae pv. Oryzae (Xoo). Map-based cloning revealed that lc7 encodes a mutant ferredoxin-dependent glutamate synthase1 (Fd-GOGAT1). Fd-GOGAT1 has been proposed to have great potential for improving nitrogen-use efficiency, but its function in bacterial resistance has not been reported. The lc7 mutant accumulates excessive levels of ROS (reactive oxygen species) in the leaves, causing the leaf color to become yellow after the four-leaf stage. Compared to the wild type, lc7 mutants have a broad-spectrum high resistance to seven Xoo strains. Differentially expressed genes (DEGs) and qRT-PCR analysis indicate that many defense pathways that are involved in this broad-spectrum resistance are activated in the lc7 mutant. These results suggest that Fd-GOGAT1 plays an important role in broad-spectrum bacterial blight resistance, in addition to modulating nitrogen assimilation and chloroplast development.

Indexed as

Disease ResistanceMutationAmino Acid OxidoreductasesGene Expression Regulation, PlantNitrogenOryzaPlant DiseasesPlant LeavesPlant ProteinsReactive Oxygen SpeciesXanthomonasAmino Acid Oxidoreductasesglutamate synthase (ferredoxin)NitrogenPlant ProteinsReactive Oxygen Species

Identifiers

PMID27211925
PMCPMC4876388
OpenAlexW2405261387

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.