Evidence map›Paper›PMID 27210832›Full record

ArticleScientific reports2016

Horizontal Gene Transfer of Pectinases from Bacteria Preceded the Diversification of Stick and Leaf Insects.

Matan Shelomi, Etienne G J Danchin, David Heckel, Benjamin Wipfler, Sven Bradler, Xin Zhou, Yannick Pauchet

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 66 citations in OpenAlex.

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  7. Metabolic novelty originating from horizontal gene transfer is essential for leaf beetle survival.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  19. A new strain of Aspergillus tubingensis for high-activity pectinase production.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2019
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 5 countries.

Matan ShelomiDepartment of Entomology, Max-Planck Institute für chemische Ökologie, Hans-Knöll-Str. 8, 07745 Jena Germany.
Etienne G J Danchin
David HeckelDepartment of Entomology, Max-Planck Institute für chemische Ökologie, Hans-Knöll-Str. 8, 07745 Jena Germany.
Benjamin WipflerFriedrich-Schiller-Universität Jena, Institut für Spezielle Zoologie und Evolutionsbiologie, Erbertstr. 1, 07743 Jena, Germany.
Sven BradlerJohann-Friedrich-Blumenbach-Institut für Zoologie und Anthropologie, Georg-August-Universität Göttingen, Berliner Str. 28, 37073 Göttingen, Germany.
Xin ZhouChina National GeneBank, BGI-Shenzhen, Beishan Road, Beishan Industrial Zone, Yantian District, 518083, Shenzhen, Guangdong Province, China.
Yannick PauchetDepartment of Entomology, Max-Planck Institute für chemische Ökologie, Hans-Knöll-Str. 8, 07745 Jena Germany.
Centre National de la Recherche Scientifique · FRChina National GeneBank · CNInstitut de Biologia Evolutiva · ESUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genes acquired by horizontal transfer are increasingly being found in animal genomes. Understanding their origin and evolution requires knowledge about the phylogenetic relationships from both source and recipient organisms. We used RNASeq data and respective assembled transcript libraries to trace the evolutionary history of polygalacturonase (pectinase) genes in stick insects (Phasmatodea). By mapping the distribution of pectinase genes on a Polyneoptera phylogeny, we identified the transfer of pectinase genes from known phasmatodean gut microbes into the genome of an early euphasmatodean ancestor that took place between 60 and 100 million years ago. This transfer preceded the rapid diversification of the suborder, enabling symbiont-free pectinase production that would increase the insects' digestive efficiency and reduce dependence on microbes. Bacteria-to-insect gene transfer was thought to be uncommon, however the increasing availability of large-scale genomic data may change this prevailing notion.

Indexed as

Gene Transfer, HorizontalAnimalsBacteriaEvolution, MolecularGastrointestinal MicrobiomeInsect ProteinsNeopteraPhylogenyPolygalacturonaseSequence Analysis, RNAInsect ProteinsPolygalacturonase

Identifiers

PMID27210832
PMCPMC4876471
OpenAlexW2398772036

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.