Evidence map›Paper›PMID 27210763›Full record

ArticleCell reports2016

IGF2BP3 Modulates the Interaction of Invasion-Associated Transcripts with RISC.

Hanane Ennajdaoui, Jonathan M Howard, Timothy Sterne-Weiler, Fereshteh Jahanbani, Doyle J Coyne, Philip J Uren, Marija Dargyte, Sol Katzman, Jolene M Draper, Andrew Wallace and 9 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. IGF2BP3 recognizes mThe EMBO journal · 2026
    Article
  6. Article
  7. IGF2BP3 remodels the microRNA targeting landscape in MLL-AF4 leukemia.bioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. IGF2BPs as novel mGenes & diseases · 2024
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. The roles and implications of RNA mNature reviews. Clinical oncology · 2023
    Review
  19. Article
  20. Review

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Hanane EnnajdaouiDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA; The Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada.
Jonathan M HowardDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Timothy Sterne-WeilerDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA; The Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada.
Fereshteh JahanbaniDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA; Department of Genetics, Stanford University, 3165 Porter Drive, Palo Alto, CA 94304, USA.
Doyle J CoyneDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Philip J UrenMolecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, CA 90089, USA.
Marija DargyteDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Sol KatzmanCenter for Biomolecular Science and Engineering, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Jolene M DraperDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Andrew WallaceDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Oscar CazarezDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Suzanne C BurnsChildren's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
Mei QiaoChildren's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
Lindsay HinckDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA.
Andrew D SmithMolecular and Computational Biology Section, Division of Biological Sciences, University of Southern California, Los Angeles, CA 90089, USA.
Masoud M ToloueBioo Scientific Corporation, 7500 Burleston Road, Austin, TX 78744, USA.
Benjamin J BlencoweThe Donnelly Centre, University of Toronto, Toronto, ON M5S 1A1, Canada.
Luiz O F PenalvaChildren's Cancer Research Institute, University of Texas Health Science Center at San Antonio, San Antonio, TX 78229, USA.
Jeremy R SanfordDepartment of Molecular, Cellular and Developmental Biology, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA 95060, USA. Electronic address: jsanfor2@ucsc.edu.
University of California, Santa Cruz · USThe University of Texas Health Science Center at San Antonio · USUniversity of Southern California · USBioo Scientific (United States) · USUniversity of Toronto · CA

Funding

UNIVERSITY OF CALIFORNIA, SANTA CRUZ IMSD PROGRAMR25GM058903 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI JURICA, MELISSA S · 1999 to 2019
$12.2M
Training Program/Molecular/Cell/Developmental BiologyT32GM008646 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI STROME, SUSAN · 1999 to 2018
$3.7M
Computational Methods for Deep Sequencing Based RBP Binding Motif CharacterizatioR01HG006015 · NHGRI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI PENALVA, LUIZ OTAVIO, SMITH, ANDREW DAVID · 2011 to 2017
$2.6M
RE: Regulation of mammary branching morphogenesis by Slit/Robo 1 signalingR01GM098897 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI HINCK, LINDSAY E · 2011 to 2014
$1.6M
Regulation of mRNA isoform fateR01GM109146 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SANFORD, JEREMY ROBERT · 2014 to 2017
$1.2M
Genomic analysis of RNA binding protein target specificityR01GM085121 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI SANFORD, JEREMY ROBERT · 2008 to 2010
$1.1M
Protein Bound RNA SequencingR41HG007336 · NHGRI · BIOO SCIENTIFIC CORPORATION · PI TOLOUE, MASOUD · 2014 to 2014
$225k
CIHRNHGRI NIH HHS R01 HG006015NHGRI NIH HHS R41 HG007336NIGMS NIH HHS R01 GM085121NIGMS NIH HHS R01 GM098897NIGMS NIH HHS R01 GM109146NIGMS NIH HHS R25 GM058903NIGMS NIH HHS T32 GM008646
6 · The paper itself

Abstract

Insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3) expression correlates with malignancy, but its role(s) in pathogenesis remains enigmatic. We interrogated the IGF2BP3-RNA interaction network in pancreatic ductal adenocarcinoma (PDAC) cells. Using a combination of genome-wide approaches, we have identified 164 direct mRNA targets of IGF2BP3. These transcripts encode proteins enriched for functions such as cell migration, proliferation, and adhesion. Loss of IGF2BP3 reduced PDAC cell invasiveness and remodeled focal adhesion junctions. Individual nucleotide resolution crosslinking immunoprecipitation (iCLIP) revealed significant overlap of IGF2BP3 and microRNA (miRNA) binding sites. IGF2BP3 promotes association of the RNA-induced silencing complex (RISC) with specific transcripts. Our results show that IGF2BP3 influences a malignancy-associated RNA regulon by modulating miRNA-mRNA interactions.

Indexed as

AdenocarcinomaArgonaute ProteinsCarcinoma, Pancreatic DuctalCell Line, TumorFocal AdhesionsGene Expression Regulation, NeoplasticHeLa CellsHumansMicroRNAsNeoplasm InvasivenessPolymorphism, Single NucleotideRNA-Binding ProteinsRNA-Induced Silencing ComplexRNA, MessengerRNA, NeoplasmAGO2 protein, humanArgonaute ProteinsIGF2BP3 protein, humanMicroRNAsRNA-Binding ProteinsRNA-Induced Silencing ComplexRNA, MessengerRNA, Neoplasm

Identifiers

PMID27210763
PMCPMC4889463
OpenAlexW2397748500

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.