Evidence map›Paper›PMID 27209581›Full record

ArticleMolecular biology reports2016

Molecular cloning and characterization of drought stress responsive abscisic acid-stress-ripening (Asr 1) gene from wild jujube, Ziziphus nummularia (Burm.f.) Wight & Arn.

Jasdeep Chatrath Padaria, Radha Yadav, Avijit Tarafdar, Showkat Ahmad Lone, Kanika Kumar, Palaiyur Nanjappan Sivalingam

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Article in Molecular biology reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Introgression of ΔTransgenic research · 2024
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  2. Discovering the regulators of heat stress tolerance inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2024
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  3. Identification of theInternational journal of molecular sciences · 2023
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  5. Molecules (Basel, Switzerland) · 2022
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  6. Article
  7. Article
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  10. Abscisic Acid, Stress, and Ripening (BioMed research international · 2020
    Article
  11. Frontiers in plant science · 2019
    Article
  12. International journal of molecular sciences · 2018
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jasdeep Chatrath PadariaNational Research Centre on Plant Biotechnology, PUSA Campus, New Delhi, India. jasdeep_kaur64@yahoo.co.in.
Radha YadavNational Research Centre on Plant Biotechnology, PUSA Campus, New Delhi, India.
Avijit TarafdarNational Research Centre on Plant Biotechnology, PUSA Campus, New Delhi, India.
Showkat Ahmad LoneNational Research Centre on Plant Biotechnology, PUSA Campus, New Delhi, India.
Kanika KumarNational Research Centre on Plant Biotechnology, PUSA Campus, New Delhi, India.
Palaiyur Nanjappan SivalingamCentral Institute for Subtropical Horticulture, Bikaner, Rajasthan, India.
National Research Centre on Plant Biotechnology · INCentral Institute For Subtropical Horticulture · INInternational Crops Research Institute for the Semi-Arid Tropics · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Drought is a calamitous abiotic stress hampering agricultural productivity all over the world and its severity is likely to increase further. Abscisic acid-stress-ripening proteins (ASR), are a group of small hydrophilic proteins which are induced by abscisic acid, stress and ripening in many plants. In the present study, ZnAsr 1 gene was fully characterized for the first time from Ziziphus nummularia, which is one of the most low water forbearing plant. Full length ZnAsr 1 gene was characterised and in silico analysis of ZnASR1 protein was done for predicting its phylogeny and physiochemical properties. To validate transcriptional pattern of ZnAsr 1 in response to drought stress, expression profiling in polyethylene glycol (PEG) induced Z. nummularia seedlings was studied by RT-qPCR analysis and heterologous expression of the recombinant ZnAsr1 in Escherichia coli. The nucleotide sequence analysis revealed that the complete open reading frame of ZnAsr 1 is 819 bp long encoding a protein of 273 amino acid residues, consisting of a histidine rich N terminus with an abscisic acid/water deficit stress domain and a nuclear targeting signal at the C terminus. In expression studies, ZnAsr 1 gene was found to be highly upregulated under drought stress and recombinant clones of E. coli cells expressing ZnASR1 protein showed better survival in PEG containing media. ZnAsr1 was proven to enhance drought stress tolerance in the recombinant E.coli cells expressing ZnASR1. The cloned ZnAsr1 after proper validation in a plant system, can be used to develop drought tolerant transgenic crops.

Indexed as

Adaptation, PhysiologicalAmino Acid SequenceBase SequenceCloning, MolecularDehydrationDroughtsPhylogenyPlant ProteinsSeedlingsSequence Analysis, DNAStress, PhysiologicalTranscriptomeZiziphusPlant ProteinsPhylogenetic analysisRT-qPCRSDS-PAGEZiziphus nummulariaZnAsr1 gene

Identifiers

PMID27209581
OpenAlexW2406831530

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.