Evidence map›Paper›PMID 27209367›Full record

ReviewCell calcium2016

Subcellular ROS imaging methods: Relevance for the study of calcium signaling.

David M Booth, Suresh K Joseph, György Hajnóczky

Abstract readReview
In one paragraph

Review in Cell calcium, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. OPA1 Modulates Mitochondrial CaFrontiers in cell and developmental biology · 2021
    Article
  5. Article
  6. Mitochondrial Function in Enamel Development.Frontiers in physiology · 2020
    Article
  7. Advance of Seriniquinone Analogues as Melanoma Agents.ACS medicinal chemistry letters · 2019
    Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

David M BoothMitoCare Center for Mitochondrial Imaging Research and Diagnostics, Department of Pathology, Anatomy and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA. Electronic address: david.booth@jefferson.edu.
Suresh K JosephMitoCare Center for Mitochondrial Imaging Research and Diagnostics, Department of Pathology, Anatomy and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA.
György HajnóczkyMitoCare Center for Mitochondrial Imaging Research and Diagnostics, Department of Pathology, Anatomy and Cell Biology, Thomas Jefferson University, Philadelphia, PA, USA. Electronic address: gyorgy.hajnoczky@jefferson.edu.

Funding

MITOCHONDRIAL CALCIUM SIGNALING IN CELL DEATHR01GM059419 · NIGMS · THOMAS JEFFERSON UNIVERSITY · PI HAJNOCZKY, GYORGY · 2000 to 2016
$4.0M
Study of the mitochondrial-cellular response to environmental stress by flourescence imagingR33ES025672 · NIEHS · THOMAS JEFFERSON UNIVERSITY · PI CSORDAS, GYORGY, HAJNOCZKY, GYORGY · 2017 to 2019
$1.5M
Redox Regulation of Intracellular Calcium SignalingR01DK103558 · NIDDK · THOMAS JEFFERSON UNIVERSITY · PI HAJNOCZKY, GYORGY, JOSEPH, SURESH K · 2015 to 2018
$1.4M
Study of the mitochondrial-cellular response to environmental stress by flourescence imagingR21ES025672 · NIEHS · THOMAS JEFFERSON UNIVERSITY · PI CSORDAS, GYORGY, HAJNOCZKY, GYORGY · 2015 to 2016
$423k
NIDDK NIH HHS R01 DK103558NIEHS NIH HHS R21 ES025672NIEHS NIH HHS R33 ES025672NIGMS NIH HHS R01 GM059419
6 · The paper itself

Abstract

Recent advances in genetically encoded fluorescent probes have dramatically increased the toolkit available for imaging the intracellular environment. Perhaps the biggest improvements have been made in sensing specific reactive oxygen species (ROS) and redox changes under physiological conditions. The new generation of probes may be targeted to a wide range of subcellular environments. By targeting such probes to compartments and organelle surfaces they may be exposed to environments, which support local signal transduction and regulation. The close apposition of the endoplasmic reticulum (ER) with mitochondria and other organelles forms such a local environment where Ca(2+) dynamics are greatly enhanced compared to the bulk cytosol. We describe here how newly developed genetically encoded redox indicators (GERIs) might be used to monitor ROS and probe their interaction with Ca(2+) at both global and local level.

Indexed as

Calcium SignalingImaging, Three-DimensionalAnimalsEndoplasmic ReticulumHumansMitochondriaReactive Oxygen SpeciesSubcellular FractionsReactive Oxygen SpeciesGrx1-roGFP2H(2)O(2)HyPerRedoxSypHer

Identifiers

PMID27209367
PMCPMC4996722

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.