Evidence map›Paper›PMID 27209317›Full record

ArticleTransgenic research2016

Altered gene expression in the lower respiratory tract of Car6 (-/-) mice.

Maarit S Patrikainen, Peiwen Pan, Harlan R Barker, Seppo Parkkila

Abstract read
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In one paragraph

Article in Transgenic research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Carbonic Anhydrase Inhibitors in Oncology.Sub-cellular biochemistry · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Carbonic Anhydrase VI in Skin Wound Healing Study onInternational journal of molecular sciences · 2020
    Article
  6. Article
  7. Nuclear carbonic anhydrase 6B associates with PRMT5 to epigenetically promote IL-12 expression in innate response.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

Maarit S PatrikainenSchool of Medicine, University of Tampere, 33014, Tampere, Finland. Maarit.Patrikainen@uta.fi.
Peiwen PanSchool of Medicine, University of Tampere, 33014, Tampere, Finland.
Harlan R BarkerSchool of Medicine, University of Tampere, 33014, Tampere, Finland.
Seppo ParkkilaSchool of Medicine, University of Tampere, 33014, Tampere, Finland.
Sanford Burnham Prebys Medical Discovery Institute · USTampere University · FITampere University · FITampere University Hospital · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

From birth, the respiratory tract mucosa is exposed to various chemical, physical, and microbiological stress factors. Efficient defense mechanisms and strictly regulated renewal systems in the mucosa are thus required. Carbonic anhydrase VI (CA VI) is the only secreted isoenzyme of the α-CA gene family. It is transported in high concentrations in saliva and milk into the alimentary tract where it contributes to optimal pH homeostasis. Earlier study of transcriptomic responses of Car6 (-/-) mice has shown changes in the response to oxidative stress and brown fat cell differentiation in the submandibular gland. It has been suggested that CA VI delivered to the mucosal surface of the bronchiolar epithelium is an essential factor in defense and renewal of the lining epithelium. In this study, the transcriptional effects of CA VI deficiency were investigated in both trachea and lung of Car6 (-/-) mice using a cDNA microarray analysis. Functional clustering of the results indicated significant changes of gene transcription in the lower airways. The altered biological processes included antigen transport by M-cells, potassium transport, muscle contraction, and thyroid hormone synthesis. Immunohistochemical staining confirmed the absence of CA VI in the submandibular gland of Car6 (-/-) mice. Immunostaining of the trachea and lung samples revealed no differences between the knockout and wild type groups nor were any morphological changes observed. The present findings can help us to recognize novel functions for CA VI-one of the major protein constituents of saliva and milk.

Indexed as

AnimalsCarbonic AnhydrasesGene Expression RegulationLungMiceMice, KnockoutMilkMucous MembraneOligonucleotide Array Sequence AnalysisProtein BiosynthesisRespiratory MucosaRespiratory SystemSalivaSubmandibular GlandTracheaTranscriptomeCarbonic Anhydrasescarbonic anhydrase VICarbonic anhydrasecDNA microarrayImmune responseLungTrachea

Identifiers

PMID27209317
OpenAlexW2398317819

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.