Evidence map›Paper›PMID 27208304›Full record

ArticlePlant physiology2016

Mitochondrial and Chloroplast Stress Responses Are Modulated in Distinct Touch and Chemical Inhibition Phases.

Olivier Van Aken, Inge De Clercq, Aneta Ivanova, Simon R Law, Frank Van Breusegem, A Harvey Millar, James Whelan

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
6.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 101 citations in OpenAlex.

  1. Pooled it
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  7. Genome-wide identification of the NAC family inFrontiers in plant science · 2024
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  9. Endoplasmic reticulum-bound ANAC013 factor is cleaved by RHOMBOID-LIKE 2 during the initial response to hypoxia inProceedings of the National Academy of Sciences of the United States of America · 2023
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  13. The Tangled Knots of Neuroscientific Experimentation.Integrative psychological & behavioral science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Olivier Van AkenARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.) olivier.van.aken@uwa.edu.au.ORCID 0000-0003-4024-968X
Inge De ClercqARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.).ORCID 0000-0001-8125-1239
Aneta IvanovaARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.).
Simon R LawARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.).ORCID 0000-0003-0389-6650
Frank Van BreusegemARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.).ORCID 0000-0002-3147-0860
A Harvey MillarARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.).
James WhelanARC Centre of Excellence in Plant Energy Biology, Faculty of Science, The University of Western Australia, Crawley 6009, Western Australia, Australia (O.V.A., A.I., A.H.M.);Department of Botany, ARC Centre of Excellence in Plant Energy Biology, School of Life Science, La Trobe University, Melbourne, Victoria 3086, Australia (I.D.C., S.R.L.);Department of Plant Systems Biology, VIB, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.);Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052 Gent, Belgium (I.D.C., F.V.B.); andDepartment of Plant Physiology, Umeå Plant Science Centre, Umeå University, S-90187 Umeå, Sweden (S.R.L.).
The University of Western Australia · AULa Trobe University · AUGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Previous studies have identified a range of transcription factors that modulate retrograde regulation of mitochondrial and chloroplast functions in Arabidopsis (Arabidopsis thaliana). However, the relative importance of these regulators and whether they act downstream of separate or overlapping signaling cascades is still unclear. Here, we demonstrate that multiple stress-related signaling pathways, with distinct kinetic signatures, converge on overlapping gene sets involved in energy organelle function. The transcription factor ANAC017 is almost solely responsible for transcript induction of marker genes around 3 to 6 h after chemical inhibition of organelle function and is a key regulator of mitochondrial and specific types of chloroplast retrograde signaling. However, an independent and highly transient gene expression phase, initiated within 10 to 30 min after treatment, also targets energy organelle functions, and is related to touch and wounding responses. Metabolite analysis demonstrates that this early response is concurrent with rapid changes in tricarboxylic acid cycle intermediates and large changes in transcript abundance of genes encoding mitochondrial dicarboxylate carrier proteins. It was further demonstrated that transcription factors AtWRKY15 and AtWRKY40 have repressive regulatory roles in this touch-responsive gene expression. Together, our results show that several regulatory systems can independently affect energy organelle function in response to stress, providing different means to exert operational control.

Indexed as

Antimycin AArabidopsisArabidopsis ProteinsChloroplastsEnergy MetabolismFluoroacetatesGene Expression Regulation, PlantMitochondriaMitochondrial ProteinsPlants, Genetically ModifiedSignal TransductionStress, PhysiologicalTranscription FactorsANAC017 protein, ArabidopsisAntimycin AArabidopsis ProteinsFluoroacetatesfluoroacetic acidMitochondrial ProteinsOM66 protein, ArabidopsisTranscription FactorsWRKY15 protein, ArabidopsisWRKY40 protein, Arabidopsis

Identifiers

PMID27208304
PMCPMC4936557
OpenAlexW2357313150

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.