Evidence map›Paper›PMID 27208286›Full record

ArticlePlant physiology2016

Different Functions of the Paralogs to the N-Terminal Domain of the Orange Carotenoid Protein in the Cyanobacterium Anabaena sp. PCC 7120.

Rocío López-Igual, Adjélé Wilson, Ryan L Leverenz, Matthew R Melnicki, Céline Bourcier de Carbon, Markus Sutter, Aiko Turmo, François Perreau, Cheryl A Kerfeld, Diana Kirilovsky

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 71 citations in OpenAlex.

  1. Transcriptional and cellular reprogramming inCurrent research in microbial sciences · 2026
    Article
  2. Phycobilisome core architecture influences photoprotective quenching by the Orange Carotenoid Protein.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Rocío López-IgualInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).
Adjélé WilsonInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).
Ryan L LeverenzInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).ORCID 0000-0002-0349-1779
Matthew R MelnickiInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).ORCID 0000-0001-5952-0674
Céline Bourcier de CarbonInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).
Markus SutterInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).
Aiko TurmoInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).
François PerreauInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).ORCID 0000-0001-7873-9866
Cheryl A KerfeldInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.).ORCID 0000-0002-9977-8482
Diana KirilovskyInstitute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, 91198 Gif sur Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);Institut de Biologie et Technologies de Saclay (iBiTec-S), Commissariat à l'Energie Atomique, 91191 Gif-sur-Yvette, France (R.L.-I., A.W., C.B.d.C., D.K.);MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824 (R.L.L., M.S., A.T., C.A.K.);Department of Plant and Microbial Biology, University of California, Berkeley, California 94720 (M.R.M., C.A.K.);Physical Biosciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720 (M.R.M., M.S., C.A.K.); andINRA, Institut Jean-Pierre Bourgin, UMR 1318, ERL CNRS 3559, Saclay Plant Sciences, F-78026 Versailles, France (F.P.) diana.kirilovsky@cea.fr.ORCID 0000-0003-2146-3103
Université Paris-Sud · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The photoactive Orange Carotenoid Protein (OCP) is involved in cyanobacterial photoprotection. Its N-terminal domain (NTD) is responsible for interaction with the antenna and induction of excitation energy quenching, while the C-terminal domain is the regulatory domain that senses light and induces photoactivation. In most nitrogen-fixing cyanobacterial strains, there are one to four paralogous genes coding for homologs to the NTD of the OCP. The functions of these proteins are unknown. Here, we study the expression, localization, and function of these genes in Anabaena sp. PCC 7120. We show that the four genes present in the genome are expressed in both vegetative cells and heterocysts but do not seem to have an essential role in heterocyst formation. This study establishes that all four Anabaena NTD-like proteins can bind a carotenoid and the different paralogs have distinct functions. Surprisingly, only one paralog (All4941) was able to interact with the antenna and to induce permanent thermal energy dissipation. Two of the other Anabaena paralogs (All3221 and Alr4783) were shown to be very good singlet oxygen quenchers. The fourth paralog (All1123) does not seem to be involved in photoprotection. Structural homology modeling allowed us to propose specific features responsible for the different functions of these soluble carotenoid-binding proteins.

Indexed as

AnabaenaBacterial ProteinsCarotenoidsElectron Spin Resonance SpectroscopyEscherichia coliFluorescenceGene Expression Regulation, BacterialGreen Fluorescent ProteinsPhycobilisomesProtein DomainsBacterial ProteinsCarotenoidsGreen Fluorescent ProteinsPhycobilisomes

Identifiers

PMID27208286
PMCPMC4936580
OpenAlexW2374753354

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