Evidence map›Paper›PMID 27208262›Full record

ArticlePlant physiology2016

Characterization of Function of the GlgA2 Glycogen/Starch Synthase in Cyanobacterium sp. Clg1 Highlights Convergent Evolution of Glycogen Metabolism into Starch Granule Aggregation.

Derifa Kadouche, Mathieu Ducatez, Ugo Cenci, Catherine Tirtiaux, Eiji Suzuki, Yasunori Nakamura, Jean-Luc Putaux, Amandine Durand Terrasson, Sandra Diaz-Troya, Francisco Javier Florencio and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 5 countries.

Derifa KadoucheUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).
Mathieu DucatezUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0003-4941-4266
Ugo CenciUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0001-9725-9833
Catherine TirtiauxUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-0424-5828
Eiji SuzukiUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-0153-7497
Yasunori NakamuraUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0001-7660-0078
Jean-Luc PutauxUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-9760-5369
Amandine Durand TerrassonUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0003-3415-1512
Sandra Diaz-TroyaUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-5878-9062
Francisco Javier FlorencioUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-2068-7861
Maria Cecilia AriasUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).
Alexander StriebeckUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-0910-2885
Monica PalcicUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.).ORCID 0000-0002-5221-089X
Steven G BallUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.) steven.ball@univ-lille1.fr christophe.colleoni@univ-lille1.fr.ORCID 0000-0003-1629-1650
Christophe ColleoniUniversité Lille, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Unité Mixte de Recherche 8576, Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France (D.K., M.D., U.C., C.T., M.C.A., S.G.B., C.C.);Department of Biological Production, Akita Prefectural University, Akita 010-0195 Japan (E.S., Y.N.);Centre de Recherches sur Les Macromolécules Végétales, Centre National de la Recherche Scientifique, Université Grenoble Alpes, F-38041 Grenoble cedex 9, France (J.-L.P., A.D.T.);Instituto de Bioquímica Vegetal y Fotosíntesis cic Cartuja, Consejo Superior de Investigaciones Científicas-Universidad de Sevilla, 41092 Seville, Spain (S.D.-T., F.J.F.);Raw Materials Group, Carlsberg Laboratory, 1799 Copenhagen V, Denmark (A.S.); andDepartment of Biochemistry and Microbiology, University of Victoria, Victoria, British Columbia, Canada V8W 3P6 (M.P.) steven.ball@univ-lille1.fr christophe.colleoni@univ-lille1.fr.ORCID 0000-0002-6534-6120
Unité de Glycobiologie Structurale et Fonctionnelle · FRCentre National de la Recherche Scientifique · FRConsejo Superior de Investigaciones Científicas · ESCarlsberg Laboratory · DKUniversity of Victoria · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

At variance with the starch-accumulating plants and most of the glycogen-accumulating cyanobacteria, Cyanobacterium sp. CLg1 synthesizes both glycogen and starch. We now report the selection of a starchless mutant of this cyanobacterium that retains wild-type amounts of glycogen. Unlike other mutants of this type found in plants and cyanobacteria, this mutant proved to be selectively defective for one of the two types of glycogen/starch synthase: GlgA2. This enzyme is phylogenetically related to the previously reported SSIII/SSIV starch synthase that is thought to be involved in starch granule seeding in plants. This suggests that, in addition to the selective polysaccharide debranching demonstrated to be responsible for starch rather than glycogen synthesis, the nature and properties of the elongation enzyme define a novel determinant of starch versus glycogen accumulation. We show that the phylogenies of GlgA2 and of 16S ribosomal RNA display significant congruence. This suggests that this enzyme evolved together with cyanobacteria when they diversified over 2 billion years ago. However, cyanobacteria can be ruled out as direct progenitors of the SSIII/SSIV ancestral gene found in Archaeplastida. Hence, both cyanobacteria and plants recruited similar enzymes independently to perform analogous tasks, further emphasizing the importance of convergent evolution in the appearance of starch from a preexisting glycogen metabolism network.

Indexed as

Biological EvolutionBacterial ProteinsCyanobacteriaEscherichia coliGenome, BacterialGlycogenGlycogen SynthaseMutationPhylogenyPolysaccharides, BacterialStarchStarch SynthaseSynechocystisBacterial ProteinsGlycogenGlycogen SynthasePolysaccharides, BacterialStarchStarch Synthase

Identifiers

PMID27208262
PMCPMC4936547
OpenAlexW2403389107

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